Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-4A0A1B0GX49 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC13.77□□□□□ -0.21
TRBV6-4A0A1B0GX49 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC13.77□□□□□ -0.21
TRBV6-4A0A1B0GX49 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-4A0A1B0GX49 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-4A0A1B0GX49 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC13.77□□□□□ -0.21
TRBV6-4A0A1B0GX49 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 GOLGA6L3-201ENST00000507199 1679 ntBASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 TREX2-204ENST00000370212 861 ntTSL 5 BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 AC008687.6-201ENST00000596318 630 ntBASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 AC124283.5-201ENST00000624661 1809 ntBASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-4A0A1B0GX49 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-4A0A1B0GX49 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-4A0A1B0GX49 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-4A0A1B0GX49 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-4A0A1B0GX49 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-4A0A1B0GX49 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC13.75□□□□□ -0.21
TRBV6-4A0A1B0GX49 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-4A0A1B0GX49 AL032819.2-201ENST00000624543 2162 ntBASIC13.75□□□□□ -0.21
TRBV6-4A0A1B0GX49 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-4A0A1B0GX49 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-4A0A1B0GX49 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-4A0A1B0GX49 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-4A0A1B0GX49 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-4A0A1B0GX49 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-4A0A1B0GX49 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-4A0A1B0GX49 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-4A0A1B0GX49 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TRBV6-4A0A1B0GX49 AC018445.3-201ENST00000624177 1945 ntBASIC13.75□□□□□ -0.21
TRBV6-4A0A1B0GX49 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TRBV6-4A0A1B0GX49 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-4A0A1B0GX49 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
TRBV6-4A0A1B0GX49 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC13.75□□□□□ -0.21
TRBV6-4A0A1B0GX49 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-4A0A1B0GX49 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TRBV6-4A0A1B0GX49 SOX15-203ENST00000570788 1093 ntBASIC13.75□□□□□ -0.21
TRBV6-4A0A1B0GX49 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-4A0A1B0GX49 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC13.75□□□□□ -0.21
TRBV6-4A0A1B0GX49 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC13.75□□□□□ -0.21
TRBV6-4A0A1B0GX49 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-4A0A1B0GX49 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-4A0A1B0GX49 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-4A0A1B0GX49 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-4A0A1B0GX49 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-4A0A1B0GX49 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-4A0A1B0GX49 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-4A0A1B0GX49 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-4A0A1B0GX49 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC13.74□□□□□ -0.21
TRBV6-4A0A1B0GX49 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-4A0A1B0GX49 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC13.74□□□□□ -0.21
TRBV6-4A0A1B0GX49 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-4A0A1B0GX49 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-4A0A1B0GX49 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-4A0A1B0GX49 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC13.74□□□□□ -0.21
TRBV6-4A0A1B0GX49 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
TRBV6-4A0A1B0GX49 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-4A0A1B0GX49 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-4A0A1B0GX49 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-4A0A1B0GX49 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TRBV6-4A0A1B0GX49 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms