Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV10A0A0B4J240 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV10A0A0B4J240 AC079598.2-202ENST00000546624 1451 ntBASIC13.78□□□□□ -0.2
TRAV10A0A0B4J240 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV10A0A0B4J240 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAV10A0A0B4J240 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
TRAV10A0A0B4J240 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV10A0A0B4J240 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAV10A0A0B4J240 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TRAV10A0A0B4J240 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV10A0A0B4J240 AC020907.5-201ENST00000624372 1936 ntBASIC13.78□□□□□ -0.2
TRAV10A0A0B4J240 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV10A0A0B4J240 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
TRAV10A0A0B4J240 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAV10A0A0B4J240 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TRAV10A0A0B4J240 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC13.77□□□□□ -0.2
TRAV10A0A0B4J240 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
TRAV10A0A0B4J240 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRAV10A0A0B4J240 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV10A0A0B4J240 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
TRAV10A0A0B4J240 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV10A0A0B4J240 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV10A0A0B4J240 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV10A0A0B4J240 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV10A0A0B4J240 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV10A0A0B4J240 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC13.77□□□□□ -0.21
TRAV10A0A0B4J240 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV10A0A0B4J240 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
TRAV10A0A0B4J240 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV10A0A0B4J240 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC13.77□□□□□ -0.21
TRAV10A0A0B4J240 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV10A0A0B4J240 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC13.77□□□□□ -0.21
TRAV10A0A0B4J240 FITM1-202ENST00000559294 800 ntBASIC13.77□□□□□ -0.21
TRAV10A0A0B4J240 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC13.77□□□□□ -0.21
TRAV10A0A0B4J240 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC13.77□□□□□ -0.21
TRAV10A0A0B4J240 AC012306.2-201ENST00000609350 630 ntBASIC13.77□□□□□ -0.21
TRAV10A0A0B4J240 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC13.77□□□□□ -0.21
TRAV10A0A0B4J240 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV10A0A0B4J240 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
TRAV10A0A0B4J240 PALM-208ENST00000592155 2272 ntTSL 4 BASIC13.76□□□□□ -0.21
TRAV10A0A0B4J240 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV10A0A0B4J240 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV10A0A0B4J240 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV10A0A0B4J240 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV10A0A0B4J240 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC13.76□□□□□ -0.21
TRAV10A0A0B4J240 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
TRAV10A0A0B4J240 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TRAV10A0A0B4J240 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAV10A0A0B4J240 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV10A0A0B4J240 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV10A0A0B4J240 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC13.76□□□□□ -0.21
TRAV10A0A0B4J240 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
TRAV10A0A0B4J240 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV10A0A0B4J240 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV10A0A0B4J240 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC13.76□□□□□ -0.21
TRAV10A0A0B4J240 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
TRAV10A0A0B4J240 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV10A0A0B4J240 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV10A0A0B4J240 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV10A0A0B4J240 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
TRAV10A0A0B4J240 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV10A0A0B4J240 PPOX-219ENST00000544598 813 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV10A0A0B4J240 AC145285.6-201ENST00000604632 637 ntBASIC13.76□□□□□ -0.21
TRAV10A0A0B4J240 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC13.76□□□□□ -0.21
TRAV10A0A0B4J240 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV10A0A0B4J240 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV10A0A0B4J240 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV10A0A0B4J240 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV10A0A0B4J240 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV10A0A0B4J240 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
TRAV10A0A0B4J240 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV10A0A0B4J240 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TRAV10A0A0B4J240 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
TRAV10A0A0B4J240 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TRAV10A0A0B4J240 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV10A0A0B4J240 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV10A0A0B4J240 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV10A0A0B4J240 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV10A0A0B4J240 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TRAV10A0A0B4J240 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TRAV10A0A0B4J240 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV10A0A0B4J240 TMEM179-206ENST00000616017 1645 ntBASIC13.75□□□□□ -0.21
TRAV10A0A0B4J240 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV10A0A0B4J240 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC13.75□□□□□ -0.21
TRAV10A0A0B4J240 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC13.75□□□□□ -0.21
TRAV10A0A0B4J240 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV10A0A0B4J240 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC13.75□□□□□ -0.21
TRAV10A0A0B4J240 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV10A0A0B4J240 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TRAV10A0A0B4J240 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC13.75□□□□□ -0.21
TRAV10A0A0B4J240 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV10A0A0B4J240 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC13.75□□□□□ -0.21
TRAV10A0A0B4J240 LINC01568-207ENST00000641790 1380 ntBASIC13.75□□□□□ -0.21
TRAV10A0A0B4J240 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV10A0A0B4J240 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV10A0A0B4J240 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
TRAV10A0A0B4J240 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV10A0A0B4J240 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV10A0A0B4J240 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV10A0A0B4J240 MIR1224-201ENST00000408193 85 ntBASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms