Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC15.17■□□□□ 0.02
TRBV7-1A0A0A6YYK4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TRBV7-1A0A0A6YYK4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRBV7-1A0A0A6YYK4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV7-1A0A0A6YYK4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV7-1A0A0A6YYK4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC15.16■□□□□ 0.02
TRBV7-1A0A0A6YYK4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV7-1A0A0A6YYK4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV7-1A0A0A6YYK4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV7-1A0A0A6YYK4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC15.16■□□□□ 0.02
TRBV7-1A0A0A6YYK4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC15.16■□□□□ 0.02
TRBV7-1A0A0A6YYK4 TUBB8P6-201ENST00000436895 1288 ntBASIC15.16■□□□□ 0.02
TRBV7-1A0A0A6YYK4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC15.16■□□□□ 0.02
TRBV7-1A0A0A6YYK4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV7-1A0A0A6YYK4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC15.16■□□□□ 0.02
TRBV7-1A0A0A6YYK4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV7-1A0A0A6YYK4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV7-1A0A0A6YYK4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
TRBV7-1A0A0A6YYK4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV7-1A0A0A6YYK4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
TRBV7-1A0A0A6YYK4 KRT8P8-201ENST00000434750 1448 ntBASIC15.16■□□□□ 0.02
TRBV7-1A0A0A6YYK4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC15.16■□□□□ 0.02
TRBV7-1A0A0A6YYK4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV7-1A0A0A6YYK4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC15.16■□□□□ 0.02
TRBV7-1A0A0A6YYK4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV7-1A0A0A6YYK4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRBV7-1A0A0A6YYK4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.15■□□□□ 0.02
TRBV7-1A0A0A6YYK4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV7-1A0A0A6YYK4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV7-1A0A0A6YYK4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV7-1A0A0A6YYK4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV7-1A0A0A6YYK4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV7-1A0A0A6YYK4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV7-1A0A0A6YYK4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV7-1A0A0A6YYK4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV7-1A0A0A6YYK4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRBV7-1A0A0A6YYK4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV7-1A0A0A6YYK4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV7-1A0A0A6YYK4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC15.15■□□□□ 0.02
TRBV7-1A0A0A6YYK4 KRT18P16-201ENST00000510337 1294 ntBASIC15.15■□□□□ 0.02
TRBV7-1A0A0A6YYK4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.15■□□□□ 0.02
TRBV7-1A0A0A6YYK4 MMAB-206ENST00000540016 945 ntTSL 3 BASIC15.15■□□□□ 0.02
TRBV7-1A0A0A6YYK4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC15.15■□□□□ 0.02
TRBV7-1A0A0A6YYK4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV7-1A0A0A6YYK4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC15.15■□□□□ 0.02
TRBV7-1A0A0A6YYK4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV7-1A0A0A6YYK4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TRBV7-1A0A0A6YYK4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC15.15■□□□□ 0.02
TRBV7-1A0A0A6YYK4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV7-1A0A0A6YYK4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV7-1A0A0A6YYK4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV7-1A0A0A6YYK4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TRBV7-1A0A0A6YYK4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV7-1A0A0A6YYK4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV7-1A0A0A6YYK4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV7-1A0A0A6YYK4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC15.15■□□□□ 0.02
TRBV7-1A0A0A6YYK4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV7-1A0A0A6YYK4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV7-1A0A0A6YYK4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRBV7-1A0A0A6YYK4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV7-1A0A0A6YYK4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV7-1A0A0A6YYK4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV7-1A0A0A6YYK4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV7-1A0A0A6YYK4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV7-1A0A0A6YYK4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV7-1A0A0A6YYK4 ESRRAP1-201ENST00000400596 1257 ntBASIC15.14■□□□□ 0.01
TRBV7-1A0A0A6YYK4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC15.14■□□□□ 0.01
TRBV7-1A0A0A6YYK4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
TRBV7-1A0A0A6YYK4 CD99P1-205ENST00000527459 561 ntBASIC15.14■□□□□ 0.01
TRBV7-1A0A0A6YYK4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC15.14■□□□□ 0.01
TRBV7-1A0A0A6YYK4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC15.14■□□□□ 0.01
TRBV7-1A0A0A6YYK4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV7-1A0A0A6YYK4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV7-1A0A0A6YYK4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV7-1A0A0A6YYK4 AC004264.1-201ENST00000608354 794 ntBASIC15.14■□□□□ 0.01
TRBV7-1A0A0A6YYK4 AC069544.1-201ENST00000609399 999 ntBASIC15.14■□□□□ 0.01
TRBV7-1A0A0A6YYK4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV7-1A0A0A6YYK4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV7-1A0A0A6YYK4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV7-1A0A0A6YYK4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRBV7-1A0A0A6YYK4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV7-1A0A0A6YYK4 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV7-1A0A0A6YYK4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV7-1A0A0A6YYK4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRBV7-1A0A0A6YYK4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRBV7-1A0A0A6YYK4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV7-1A0A0A6YYK4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV7-1A0A0A6YYK4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
TRBV7-1A0A0A6YYK4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV7-1A0A0A6YYK4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV7-1A0A0A6YYK4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV7-1A0A0A6YYK4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV7-1A0A0A6YYK4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV7-1A0A0A6YYK4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV7-1A0A0A6YYK4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV7-1A0A0A6YYK4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRBV7-1A0A0A6YYK4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV7-1A0A0A6YYK4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV7-1A0A0A6YYK4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
TRBV7-1A0A0A6YYK4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms