Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRAV8-1A0A0A6YYK1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-1A0A0A6YYK1 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-1A0A0A6YYK1 CROCCP3-202ENST00000420820 1947 ntBASIC14.82□□□□□ -0.04
TRAV8-1A0A0A6YYK1 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
TRAV8-1A0A0A6YYK1 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-1A0A0A6YYK1 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-1A0A0A6YYK1 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-1A0A0A6YYK1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-1A0A0A6YYK1 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-1A0A0A6YYK1 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-1A0A0A6YYK1 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-1A0A0A6YYK1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-1A0A0A6YYK1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-1A0A0A6YYK1 UQCRFS1P1-201ENST00000435169 820 ntBASIC14.82□□□□□ -0.04
TRAV8-1A0A0A6YYK1 TERF1P5-201ENST00000477545 1207 ntBASIC14.82□□□□□ -0.04
TRAV8-1A0A0A6YYK1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC14.82□□□□□ -0.04
TRAV8-1A0A0A6YYK1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC14.82□□□□□ -0.04
TRAV8-1A0A0A6YYK1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC14.82□□□□□ -0.04
TRAV8-1A0A0A6YYK1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC14.82□□□□□ -0.04
TRAV8-1A0A0A6YYK1 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-1A0A0A6YYK1 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-1A0A0A6YYK1 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
TRAV8-1A0A0A6YYK1 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV8-1A0A0A6YYK1 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-1A0A0A6YYK1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-1A0A0A6YYK1 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-1A0A0A6YYK1 AL049812.1-201ENST00000432563 2267 ntBASIC14.82□□□□□ -0.04
TRAV8-1A0A0A6YYK1 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRAV8-1A0A0A6YYK1 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-1A0A0A6YYK1 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-1A0A0A6YYK1 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRAV8-1A0A0A6YYK1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-1A0A0A6YYK1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-1A0A0A6YYK1 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-1A0A0A6YYK1 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV8-1A0A0A6YYK1 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV8-1A0A0A6YYK1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV8-1A0A0A6YYK1 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV8-1A0A0A6YYK1 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV8-1A0A0A6YYK1 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV8-1A0A0A6YYK1 PHGDH-210ENST00000641115 1638 ntBASIC14.81□□□□□ -0.04
TRAV8-1A0A0A6YYK1 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC14.81□□□□□ -0.04
TRAV8-1A0A0A6YYK1 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV8-1A0A0A6YYK1 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
TRAV8-1A0A0A6YYK1 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV8-1A0A0A6YYK1 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TRAV8-1A0A0A6YYK1 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV8-1A0A0A6YYK1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV8-1A0A0A6YYK1 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV8-1A0A0A6YYK1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV8-1A0A0A6YYK1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV8-1A0A0A6YYK1 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV8-1A0A0A6YYK1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV8-1A0A0A6YYK1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV8-1A0A0A6YYK1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC14.81□□□□□ -0.04
TRAV8-1A0A0A6YYK1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV8-1A0A0A6YYK1 AC010536.3-201ENST00000620306 533 ntBASIC14.81□□□□□ -0.04
TRAV8-1A0A0A6YYK1 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TRAV8-1A0A0A6YYK1 GAS2L1P2-201ENST00000436355 1356 ntBASIC14.81□□□□□ -0.04
TRAV8-1A0A0A6YYK1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TRAV8-1A0A0A6YYK1 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV8-1A0A0A6YYK1 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV8-1A0A0A6YYK1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV8-1A0A0A6YYK1 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV8-1A0A0A6YYK1 AL161938.1-201ENST00000569833 2180 ntBASIC14.81□□□□□ -0.04
TRAV8-1A0A0A6YYK1 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV8-1A0A0A6YYK1 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV8-1A0A0A6YYK1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV8-1A0A0A6YYK1 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC14.81□□□□□ -0.04
TRAV8-1A0A0A6YYK1 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV8-1A0A0A6YYK1 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV8-1A0A0A6YYK1 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
TRAV8-1A0A0A6YYK1 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-1A0A0A6YYK1 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-1A0A0A6YYK1 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TRAV8-1A0A0A6YYK1 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
TRAV8-1A0A0A6YYK1 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TRAV8-1A0A0A6YYK1 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-1A0A0A6YYK1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-1A0A0A6YYK1 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-1A0A0A6YYK1 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-1A0A0A6YYK1 AC005082.1-201ENST00000413042 2259 ntBASIC14.8□□□□□ -0.04
TRAV8-1A0A0A6YYK1 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV8-1A0A0A6YYK1 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-1A0A0A6YYK1 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-1A0A0A6YYK1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC14.8□□□□□ -0.04
TRAV8-1A0A0A6YYK1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-1A0A0A6YYK1 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
TRAV8-1A0A0A6YYK1 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-1A0A0A6YYK1 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-1A0A0A6YYK1 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-1A0A0A6YYK1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV8-1A0A0A6YYK1 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV8-1A0A0A6YYK1 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-1A0A0A6YYK1 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV8-1A0A0A6YYK1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-1A0A0A6YYK1 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV8-1A0A0A6YYK1 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV8-1A0A0A6YYK1 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms