Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV30A0A087WSZ9 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TRAV30A0A087WSZ9 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV30A0A087WSZ9 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAV30A0A087WSZ9 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV30A0A087WSZ9 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV30A0A087WSZ9 AC005082.1-201ENST00000413042 2259 ntBASIC15.32■□□□□ 0.04
TRAV30A0A087WSZ9 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV30A0A087WSZ9 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV30A0A087WSZ9 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV30A0A087WSZ9 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV30A0A087WSZ9 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV30A0A087WSZ9 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV30A0A087WSZ9 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV30A0A087WSZ9 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV30A0A087WSZ9 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TRAV30A0A087WSZ9 Z82202.1-201ENST00000623446 1880 ntBASIC15.31■□□□□ 0.04
TRAV30A0A087WSZ9 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV30A0A087WSZ9 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV30A0A087WSZ9 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
TRAV30A0A087WSZ9 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV30A0A087WSZ9 PWWP2AP1-201ENST00000429776 2273 ntBASIC15.31■□□□□ 0.04
TRAV30A0A087WSZ9 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC15.31■□□□□ 0.04
TRAV30A0A087WSZ9 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV30A0A087WSZ9 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV30A0A087WSZ9 CALM3-202ENST00000391918 702 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV30A0A087WSZ9 AC004911.1-201ENST00000416316 871 ntBASIC15.31■□□□□ 0.04
TRAV30A0A087WSZ9 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC15.31■□□□□ 0.04
TRAV30A0A087WSZ9 PARL-206ENST00000435888 1098 ntTSL 5 BASIC15.31■□□□□ 0.04
TRAV30A0A087WSZ9 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TRAV30A0A087WSZ9 AC105036.2-201ENST00000569468 176 ntBASIC15.31■□□□□ 0.04
TRAV30A0A087WSZ9 AL137784.2-201ENST00000607332 1000 ntBASIC15.31■□□□□ 0.04
TRAV30A0A087WSZ9 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
TRAV30A0A087WSZ9 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TRAV30A0A087WSZ9 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV30A0A087WSZ9 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV30A0A087WSZ9 MOK-233ENST00000524214 1539 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV30A0A087WSZ9 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRAV30A0A087WSZ9 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TRAV30A0A087WSZ9 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV30A0A087WSZ9 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC15.31■□□□□ 0.04
TRAV30A0A087WSZ9 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV30A0A087WSZ9 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV30A0A087WSZ9 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV30A0A087WSZ9 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV30A0A087WSZ9 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
TRAV30A0A087WSZ9 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
TRAV30A0A087WSZ9 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
TRAV30A0A087WSZ9 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV30A0A087WSZ9 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV30A0A087WSZ9 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TRAV30A0A087WSZ9 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV30A0A087WSZ9 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAV30A0A087WSZ9 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAV30A0A087WSZ9 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV30A0A087WSZ9 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV30A0A087WSZ9 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV30A0A087WSZ9 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TRAV30A0A087WSZ9 AC026185.1-201ENST00000445748 174 ntBASIC15.3■□□□□ 0.04
TRAV30A0A087WSZ9 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV30A0A087WSZ9 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV30A0A087WSZ9 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV30A0A087WSZ9 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV30A0A087WSZ9 CRK-204ENST00000574295 1391 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV30A0A087WSZ9 AC020916.1-201ENST00000587762 1774 ntBASIC15.3■□□□□ 0.04
TRAV30A0A087WSZ9 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV30A0A087WSZ9 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV30A0A087WSZ9 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV30A0A087WSZ9 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TRAV30A0A087WSZ9 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV30A0A087WSZ9 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV30A0A087WSZ9 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.3■□□□□ 0.04
TRAV30A0A087WSZ9 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TRAV30A0A087WSZ9 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
TRAV30A0A087WSZ9 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TRAV30A0A087WSZ9 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV30A0A087WSZ9 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV30A0A087WSZ9 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV30A0A087WSZ9 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV30A0A087WSZ9 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV30A0A087WSZ9 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAV30A0A087WSZ9 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV30A0A087WSZ9 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV30A0A087WSZ9 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV30A0A087WSZ9 AC116351.2-201ENST00000606540 1585 ntBASIC15.29■□□□□ 0.04
TRAV30A0A087WSZ9 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TRAV30A0A087WSZ9 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV30A0A087WSZ9 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRAV30A0A087WSZ9 AC018553.1-201ENST00000616682 1458 ntBASIC15.29■□□□□ 0.04
TRAV30A0A087WSZ9 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV30A0A087WSZ9 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV30A0A087WSZ9 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV30A0A087WSZ9 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV30A0A087WSZ9 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV30A0A087WSZ9 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TRAV30A0A087WSZ9 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV30A0A087WSZ9 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV30A0A087WSZ9 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV30A0A087WSZ9 AC073210.2-201ENST00000430369 194 ntBASIC15.29■□□□□ 0.04
TRAV30A0A087WSZ9 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms