Protein–RNA interactions for Protein: Q12428

PDH1, Probable 2-methylcitrate dehydratase, yeastyeast

Known RBP Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PDH1Q12428 LSR1LSR1 1175 nt8.13□□□□□ -1.11
PDH1Q12428 MAE1YKL029C 2010 nt8.12□□□□□ -1.11
PDH1Q12428 NME1NME1 340 nt8.12□□□□□ -1.11
PDH1Q12428 MRS6YOR370C 1812 nt8.12□□□□□ -1.11
PDH1Q12428 ATP2YJR121W 1536 nt8.1□□□□□ -1.11
PDH1Q12428 OLA1YBR025C 1185 nt8.1□□□□□ -1.11
PDH1Q12428 YKL133CYKL133C 1392 nt8.1□□□□□ -1.11
PDH1Q12428 URA8YJR103W 1737 nt8.09□□□□□ -1.11
PDH1Q12428 PDC6YGR087C 1692 nt8.08□□□□□ -1.12
PDH1Q12428 RPR1RPR1 369 nt8.08□□□□□ -1.12
PDH1Q12428 RPD3YNL330C 1302 nt8.07□□□□□ -1.12
PDH1Q12428 COS10YNR075W 1125 nt8.07□□□□□ -1.12
PDH1Q12428 YDR476CYDR476C 675 nt8.06□□□□□ -1.12
PDH1Q12428 YPT31YER031C 672 nt8.06□□□□□ -1.12
PDH1Q12428 YRF1-2YER190W 5046 nt8.04□□□□□ -1.12
PDH1Q12428 ODC1YPL134C 933 nt8.04□□□□□ -1.12
PDH1Q12428 SSL2YIL143C 2532 nt8.03□□□□□ -1.12
PDH1Q12428 YBL095WYBL095W 813 nt8.03□□□□□ -1.12
PDH1Q12428 KRR1YCL059C 951 nt8.02□□□□□ -1.13
PDH1Q12428 YIL168WYIL168W 384 nt8.02□□□□□ -1.13
PDH1Q12428 RNA170RNA170 169 nt8.02□□□□□ -1.13
PDH1Q12428 RRT6YGL146C 936 nt7.99□□□□□ -1.13
PDH1Q12428 NSG2YNL156C 900 nt7.99□□□□□ -1.13
PDH1Q12428 HXT10YFL011W 1641 nt7.99□□□□□ -1.13
PDH1Q12428 YLR358CYLR358C 564 nt7.98□□□□□ -1.13
PDH1Q12428 DMA2YNL116W 1569 nt7.97□□□□□ -1.13
PDH1Q12428 YIR035CYIR035C 765 nt7.97□□□□□ -1.13
PDH1Q12428 YML079WYML079W 606 nt7.97□□□□□ -1.13
PDH1Q12428 GGA2YHR108W 1758 nt7.97□□□□□ -1.13
PDH1Q12428 PSP2YML017W 1782 nt7.97□□□□□ -1.13
PDH1Q12428 YLR173WYLR173W 1827 nt7.96□□□□□ -1.13
PDH1Q12428 YMR316C-BYMR316C-B 309 nt7.96□□□□□ -1.14
PDH1Q12428 RHO1YPR165W 630 nt7.96□□□□□ -1.14
PDH1Q12428 AAC3YBR085W 924 nt7.96□□□□□ -1.14
PDH1Q12428 PUP2YGR253C 783 nt7.95□□□□□ -1.14
PDH1Q12428 PSD1YNL169C 1503 nt7.94□□□□□ -1.14
PDH1Q12428 CWP2YKL096W-A 279 nt7.94□□□□□ -1.14
PDH1Q12428 RPC31YNL151C 756 nt7.94□□□□□ -1.14
PDH1Q12428 HAC1YFL031W 717 nt7.93□□□□□ -1.14
PDH1Q12428 THI3YDL080C 1830 nt7.92□□□□□ -1.14
PDH1Q12428 NAS6YGR232W 687 nt7.92□□□□□ -1.14
PDH1Q12428 PMU1YKL128C 888 nt7.92□□□□□ -1.14
PDH1Q12428 THI73YLR004C 1572 nt7.92□□□□□ -1.14
PDH1Q12428 URA1YKL216W 945 nt7.91□□□□□ -1.14
PDH1Q12428 SNU66YOR308C 1764 nt7.9□□□□□ -1.14
PDH1Q12428 MDM35YKL053C-A 261 nt7.9□□□□□ -1.14
PDH1Q12428 CPT1YNL130C 1182 nt7.89□□□□□ -1.15
PDH1Q12428 YHR218WYHR218W 1812 nt7.88□□□□□ -1.15
PDH1Q12428 PUP3YER094C 618 nt7.88□□□□□ -1.15
PDH1Q12428 CYT1YOR065W 930 nt7.88□□□□□ -1.15
PDH1Q12428 DPL1YDR294C 1770 nt7.87□□□□□ -1.15
PDH1Q12428 GPM1YKL152C 744 nt7.87□□□□□ -1.15
PDH1Q12428 BUB2YMR055C 921 nt7.87□□□□□ -1.15
PDH1Q12428 JHD1YER051W 1479 nt7.87□□□□□ -1.15
PDH1Q12428 TMS1YDR105C 1422 nt7.86□□□□□ -1.15
PDH1Q12428 CBK1YNL161W 2271 nt7.86□□□□□ -1.15
PDH1Q12428 LAT1YNL071W 1449 nt7.86□□□□□ -1.15
PDH1Q12428 SPR1YOR190W 1338 nt7.85□□□□□ -1.15
PDH1Q12428 SHC1YER096W 1539 nt7.85□□□□□ -1.15
PDH1Q12428 DOC1YGL240W 753 nt7.85□□□□□ -1.15
PDH1Q12428 PRE10YOR362C 867 nt7.85□□□□□ -1.15
PDH1Q12428 TIM50YPL063W 1431 nt7.85□□□□□ -1.15
PDH1Q12428 PNS1YOR161C 1620 nt7.85□□□□□ -1.15
PDH1Q12428 SLM3YDL033C 1254 nt7.84□□□□□ -1.15
PDH1Q12428 MET8YBR213W 825 nt7.84□□□□□ -1.15
PDH1Q12428 PAB1YER165W 1734 nt7.83□□□□□ -1.16
PDH1Q12428 PIH1YHR034C 1035 nt7.83□□□□□ -1.16
PDH1Q12428 YAL019W-AYAL019W-A 570 nt7.83□□□□□ -1.16
PDH1Q12428 YHR131CYHR131C 2553 nt7.82□□□□□ -1.16
PDH1Q12428 MGM101YJR144W 810 nt7.81□□□□□ -1.16
PDH1Q12428 MLS1YNL117W 1665 nt7.81□□□□□ -1.16
PDH1Q12428 ADE2YOR128C 1716 nt7.81□□□□□ -1.16
PDH1Q12428 YHL030W-AYHL030W-A 462 nt7.8□□□□□ -1.16
PDH1Q12428 YDR467CYDR467C 327 nt7.79□□□□□ -1.16
PDH1Q12428 NCA3YJL116C 1014 nt7.79□□□□□ -1.16
PDH1Q12428 YOX1YML027W 1158 nt7.79□□□□□ -1.16
PDH1Q12428 MEP1YGR121C 1479 nt7.79□□□□□ -1.16
PDH1Q12428 YJL009WYJL009W 327 nt7.78□□□□□ -1.16
PDH1Q12428 YJL144WYJL144W 315 nt7.78□□□□□ -1.16
PDH1Q12428 AGP3YFL055W 1677 nt7.77□□□□□ -1.17
PDH1Q12428 APT1YML022W 564 nt7.77□□□□□ -1.17
PDH1Q12428 ATP23YNR020C 813 nt7.77□□□□□ -1.17
PDH1Q12428 YHL008CYHL008C 1884 nt7.77□□□□□ -1.17
PDH1Q12428 LEU4YNL104C 1860 nt7.77□□□□□ -1.17
PDH1Q12428 YBL111CYBL111C 2004 nt7.76□□□□□ -1.17
PDH1Q12428 ECM27YJR106W 2178 nt7.76□□□□□ -1.17
PDH1Q12428 YBR056WYBR056W 1506 nt7.75□□□□□ -1.17
PDH1Q12428 MRS4YKR052C 915 nt7.75□□□□□ -1.17
PDH1Q12428 YOR111WYOR111W 699 nt7.75□□□□□ -1.17
PDH1Q12428 YMC2YBR104W 990 nt7.75□□□□□ -1.17
PDH1Q12428 RTG2YGL252C 1767 nt7.74□□□□□ -1.17
PDH1Q12428 YJL045WYJL045W 1905 nt7.74□□□□□ -1.17
PDH1Q12428 HXT8YJL214W 1710 nt7.72□□□□□ -1.17
PDH1Q12428 SRY1YKL218C 981 nt7.71□□□□□ -1.18
PDH1Q12428 CRN1YLR429W 1956 nt7.71□□□□□ -1.18
PDH1Q12428 EHT1YBR177C 1356 nt7.71□□□□□ -1.18
PDH1Q12428 tE(CUC)DtE(CUC)D 72 nt7.7□□□□□ -1.18
PDH1Q12428 tE(CUC)ItE(CUC)I 72 nt7.7□□□□□ -1.18
PDH1Q12428 TOM71YHR117W 1920 nt7.7□□□□□ -1.18
PDH1Q12428 PTH2YBL057C 627 nt7.69□□□□□ -1.18
Retrieved 100 of 7,029 protein–RNA pairs in 12.2 ms