Protein–RNA interactions for Protein: Q12242

RUP1, UBA domain-containing protein RUP1, yeastyeast

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RUP1Q12242 tA(AGC)LtA(AGC)L 73 nt8□□□□□ -1.13
RUP1Q12242 tA(AGC)M1tA(AGC)M1 73 nt8□□□□□ -1.13
RUP1Q12242 tA(AGC)M2tA(AGC)M2 73 nt8□□□□□ -1.13
RUP1Q12242 tA(AGC)PtA(AGC)P 73 nt8□□□□□ -1.13
RUP1Q12242 PHB2YGR231C 933 nt8□□□□□ -1.13
RUP1Q12242 REX2YLR059C 810 nt8□□□□□ -1.13
RUP1Q12242 BEM1YBR200W 1656 nt7.99□□□□□ -1.13
RUP1Q12242 ADH3YMR083W 1128 nt7.99□□□□□ -1.13
RUP1Q12242 YPL264CYPL264C 1062 nt7.99□□□□□ -1.13
RUP1Q12242 MAS1YLR163C 1389 nt7.98□□□□□ -1.13
RUP1Q12242 GLY1YEL046C 1164 nt7.98□□□□□ -1.13
RUP1Q12242 FLX1YIL134W 936 nt7.98□□□□□ -1.13
RUP1Q12242 IPL1YPL209C 1104 nt7.98□□□□□ -1.13
RUP1Q12242 WSC4YHL028W 1818 nt7.98□□□□□ -1.13
RUP1Q12242 TOP3YLR234W 1971 nt7.97□□□□□ -1.13
RUP1Q12242 YKR012CYKR012C 378 nt7.97□□□□□ -1.13
RUP1Q12242 YPT11YNL304W 1254 nt7.97□□□□□ -1.13
RUP1Q12242 MET13YGL125W 1803 nt7.96□□□□□ -1.13
RUP1Q12242 MRN1YPL184C 1839 nt7.96□□□□□ -1.13
RUP1Q12242 RPL2AYFR031C-A 765 nt7.96□□□□□ -1.14
RUP1Q12242 SPE4YLR146C 903 nt7.96□□□□□ -1.14
RUP1Q12242 SDS24YBR214W 1584 nt7.96□□□□□ -1.14
RUP1Q12242 TOM71YHR117W 1920 nt7.95□□□□□ -1.14
RUP1Q12242 HXT9YJL219W 1704 nt7.95□□□□□ -1.14
RUP1Q12242 BUD31YCR063W 474 nt7.95□□□□□ -1.14
RUP1Q12242 INM1YHR046C 888 nt7.95□□□□□ -1.14
RUP1Q12242 YIR035CYIR035C 765 nt7.95□□□□□ -1.14
RUP1Q12242 MEP1YGR121C 1479 nt7.94□□□□□ -1.14
RUP1Q12242 CHA1YCL064C 1083 nt7.94□□□□□ -1.14
RUP1Q12242 ATP10YLR393W 840 nt7.94□□□□□ -1.14
RUP1Q12242 TGL5YOR081C 2250 nt7.94□□□□□ -1.14
RUP1Q12242 MOB1YIL106W 945 nt7.93□□□□□ -1.14
RUP1Q12242 BUB2YMR055C 921 nt7.93□□□□□ -1.14
RUP1Q12242 LRO1YNR008W 1986 nt7.93□□□□□ -1.14
RUP1Q12242 MCM5YLR274W 2328 nt7.92□□□□□ -1.14
RUP1Q12242 YCR025CYCR025C 411 nt7.92□□□□□ -1.14
RUP1Q12242 RRT6YGL146C 936 nt7.92□□□□□ -1.14
RUP1Q12242 INO1YJL153C 1602 nt7.92□□□□□ -1.14
RUP1Q12242 TDA4YJR116W 840 nt7.91□□□□□ -1.14
RUP1Q12242 YJR149WYJR149W 1215 nt7.91□□□□□ -1.14
RUP1Q12242 YER152CYER152C 1332 nt7.91□□□□□ -1.14
RUP1Q12242 VBA3YCL069W 1377 nt7.91□□□□□ -1.14
RUP1Q12242 SGF73YGL066W 1974 nt7.91□□□□□ -1.14
RUP1Q12242 ENO1YGR254W 1314 nt7.9□□□□□ -1.14
RUP1Q12242 ERR3YMR323W 1314 nt7.89□□□□□ -1.15
RUP1Q12242 ERR1YOR393W 1314 nt7.89□□□□□ -1.15
RUP1Q12242 ERR2YPL281C 1314 nt7.89□□□□□ -1.15
RUP1Q12242 CYC3YAL039C 810 nt7.89□□□□□ -1.15
RUP1Q12242 ERG6YML008C 1152 nt7.89□□□□□ -1.15
RUP1Q12242 SLG1YOR008C 1137 nt7.89□□□□□ -1.15
RUP1Q12242 FRT1YOR324C 1809 nt7.87□□□□□ -1.15
RUP1Q12242 SRP102YKL154W 735 nt7.87□□□□□ -1.15
RUP1Q12242 KTR4YBR199W 1395 nt7.86□□□□□ -1.15
RUP1Q12242 PMA2YPL036W 2844 nt7.85□□□□□ -1.15
RUP1Q12242 GGC1YDL198C 903 nt7.85□□□□□ -1.15
RUP1Q12242 RSC9YML127W 1746 nt7.85□□□□□ -1.15
RUP1Q12242 SER2YGR208W 930 nt7.84□□□□□ -1.15
RUP1Q12242 YMR253CYMR253C 1245 nt7.84□□□□□ -1.15
RUP1Q12242 DIP5YPL265W 1827 nt7.84□□□□□ -1.15
RUP1Q12242 PMT1YDL095W 2454 nt7.83□□□□□ -1.16
RUP1Q12242 YCP4YCR004C 744 nt7.83□□□□□ -1.16
RUP1Q12242 RSC4YKR008W 1878 nt7.83□□□□□ -1.16
RUP1Q12242 YFR020WYFR020W 699 nt7.82□□□□□ -1.16
RUP1Q12242 RSM7YJR113C 744 nt7.82□□□□□ -1.16
RUP1Q12242 YLR280CYLR280C 351 nt7.82□□□□□ -1.16
RUP1Q12242 ERO1YML130C 1692 nt7.81□□□□□ -1.16
RUP1Q12242 EHT1YBR177C 1356 nt7.81□□□□□ -1.16
RUP1Q12242 HTS1YPR033C 1641 nt7.8□□□□□ -1.16
RUP1Q12242 SWM1YDR260C 513 nt7.79□□□□□ -1.16
RUP1Q12242 MRP7YNL005C 1116 nt7.79□□□□□ -1.16
RUP1Q12242 SAM50YNL026W 1455 nt7.79□□□□□ -1.16
RUP1Q12242 AQR1YNL065W 1761 nt7.79□□□□□ -1.16
RUP1Q12242 WSC3YOL105C 1671 nt7.78□□□□□ -1.16
RUP1Q12242 POB3YML069W 1659 nt7.76□□□□□ -1.17
RUP1Q12242 YLR030WYLR030W 792 nt7.76□□□□□ -1.17
RUP1Q12242 CTF3YLR381W 2202 nt7.76□□□□□ -1.17
RUP1Q12242 FRA1YLL029W 2250 nt7.75□□□□□ -1.17
RUP1Q12242 YGR137WYGR137W 375 nt7.75□□□□□ -1.17
RUP1Q12242 YGR210CYGR210C 1236 nt7.75□□□□□ -1.17
RUP1Q12242 PDC5YLR134W 1692 nt7.75□□□□□ -1.17
RUP1Q12242 RUP1YOR138C 2016 nt7.74□□□□□ -1.17
RUP1Q12242 ARO3YDR035W 1113 nt7.74□□□□□ -1.17
RUP1Q12242 CKB1YGL019W 837 nt7.74□□□□□ -1.17
RUP1Q12242 RCF1YML030W 480 nt7.74□□□□□ -1.17
RUP1Q12242 TGA1tA(UGC)A 73 nt7.73□□□□□ -1.17
RUP1Q12242 tA(UGC)EtA(UGC)E 73 nt7.73□□□□□ -1.17
RUP1Q12242 tA(UGC)GtA(UGC)G 73 nt7.73□□□□□ -1.17
RUP1Q12242 tA(UGC)LtA(UGC)L 73 nt7.73□□□□□ -1.17
RUP1Q12242 tA(UGC)OtA(UGC)O 73 nt7.73□□□□□ -1.17
RUP1Q12242 PEX28YHR150W 1740 nt7.72□□□□□ -1.17
RUP1Q12242 ALG7YBR243C 1347 nt7.72□□□□□ -1.17
RUP1Q12242 AVL9YLR114C 2295 nt7.72□□□□□ -1.17
RUP1Q12242 YLR460CYLR460C 1131 nt7.71□□□□□ -1.18
RUP1Q12242 YMR007WYMR007W 381 nt7.71□□□□□ -1.18
RUP1Q12242 YPL108WYPL108W 507 nt7.71□□□□□ -1.18
RUP1Q12242 NME1NME1 340 nt7.71□□□□□ -1.18
RUP1Q12242 YJR154WYJR154W 1041 nt7.7□□□□□ -1.18
RUP1Q12242 YMR166CYMR166C 1107 nt7.7□□□□□ -1.18
RUP1Q12242 Q0010Q0010 387 nt7.7□□□□□ -1.18
RUP1Q12242 YDR306CYDR306C 1437 nt7.69□□□□□ -1.18
Retrieved 100 of 7,029 protein–RNA pairs in 18.7 ms