Protein–RNA interactions for Protein: Q04673

SSL1, General transcription and DNA repair factor IIH subunit SSL1, yeastyeast

Predicted RBP Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL1Q04673 YBL095WYBL095W 813 nt8.04□□□□□ -1.12
SSL1Q04673 NPP2YEL016C 1482 nt8.03□□□□□ -1.12
SSL1Q04673 YAL016C-AYAL016C-A 315 nt8.03□□□□□ -1.12
SSL1Q04673 REC114YMR133W 1287 nt8.03□□□□□ -1.12
SSL1Q04673 YOR343CYOR343C 327 nt8.03□□□□□ -1.12
SSL1Q04673 TPN1YGL186C 1740 nt8.02□□□□□ -1.13
SSL1Q04673 YGR210CYGR210C 1236 nt8.01□□□□□ -1.13
SSL1Q04673 HMT1YBR034C 1047 nt8.01□□□□□ -1.13
SSL1Q04673 AAC3YBR085W 924 nt8.01□□□□□ -1.13
SSL1Q04673 TGA1tA(UGC)A 73 nt7.99□□□□□ -1.13
SSL1Q04673 tA(UGC)EtA(UGC)E 73 nt7.99□□□□□ -1.13
SSL1Q04673 tA(UGC)GtA(UGC)G 73 nt7.99□□□□□ -1.13
SSL1Q04673 tA(UGC)LtA(UGC)L 73 nt7.99□□□□□ -1.13
SSL1Q04673 tA(UGC)OtA(UGC)O 73 nt7.99□□□□□ -1.13
SSL1Q04673 MTO1YGL236C 2010 nt7.99□□□□□ -1.13
SSL1Q04673 YMC2YBR104W 990 nt7.99□□□□□ -1.13
SSL1Q04673 SRN2YLR119W 642 nt7.98□□□□□ -1.13
SSL1Q04673 ATG17YLR423C 1254 nt7.98□□□□□ -1.13
SSL1Q04673 KDX1YKL161C 1302 nt7.98□□□□□ -1.13
SSL1Q04673 TMS1YDR105C 1422 nt7.97□□□□□ -1.13
SSL1Q04673 THI6YPL214C 1623 nt7.97□□□□□ -1.13
SSL1Q04673 RTG2YGL252C 1767 nt7.97□□□□□ -1.13
SSL1Q04673 ALR1YOL130W 2580 nt7.96□□□□□ -1.13
SSL1Q04673 YIR018C-AYIR018C-A 138 nt7.96□□□□□ -1.14
SSL1Q04673 MRS4YKR052C 915 nt7.96□□□□□ -1.14
SSL1Q04673 YPL108WYPL108W 507 nt7.96□□□□□ -1.14
SSL1Q04673 SNU66YOR308C 1764 nt7.96□□□□□ -1.14
SSL1Q04673 DUR3YHL016C 2208 nt7.95□□□□□ -1.14
SSL1Q04673 YIR035CYIR035C 765 nt7.94□□□□□ -1.14
SSL1Q04673 YLR460CYLR460C 1131 nt7.94□□□□□ -1.14
SSL1Q04673 YMR007WYMR007W 381 nt7.94□□□□□ -1.14
SSL1Q04673 YMR166CYMR166C 1107 nt7.93□□□□□ -1.14
SSL1Q04673 AAT1YKL106W 1356 nt7.93□□□□□ -1.14
SSL1Q04673 GCD11YER025W 1584 nt7.93□□□□□ -1.14
SSL1Q04673 MET22YOL064C 1074 nt7.92□□□□□ -1.14
SSL1Q04673 FCY1YPR062W 477 nt7.92□□□□□ -1.14
SSL1Q04673 CHS7YHR142W 951 nt7.91□□□□□ -1.14
SSL1Q04673 NBA1YOL070C 1506 nt7.91□□□□□ -1.14
SSL1Q04673 ADE2YOR128C 1716 nt7.91□□□□□ -1.14
SSL1Q04673 FET5YFL041W 1869 nt7.9□□□□□ -1.14
SSL1Q04673 HRA1HRA1 564 nt7.9□□□□□ -1.14
SSL1Q04673 RNA170RNA170 169 nt7.9□□□□□ -1.14
SSL1Q04673 YMR206WYMR206W 942 nt7.9□□□□□ -1.14
SSL1Q04673 RCR1YBR005W 642 nt7.9□□□□□ -1.14
SSL1Q04673 YRF1-3YGR296W 5580 nt7.9□□□□□ -1.15
SSL1Q04673 YRF1-6YNL339C 5580 nt7.9□□□□□ -1.15
SSL1Q04673 YRF1-7YPL283C 5580 nt7.9□□□□□ -1.15
SSL1Q04673 YBR056WYBR056W 1506 nt7.89□□□□□ -1.15
SSL1Q04673 OCH1YGL038C 1443 nt7.89□□□□□ -1.15
SSL1Q04673 YJR149WYJR149W 1215 nt7.89□□□□□ -1.15
SSL1Q04673 LSP1YPL004C 1026 nt7.89□□□□□ -1.15
SSL1Q04673 YHL008CYHL008C 1884 nt7.89□□□□□ -1.15
SSL1Q04673 CAK1YFL029C 1107 nt7.88□□□□□ -1.15
SSL1Q04673 YJL160CYJL160C 864 nt7.88□□□□□ -1.15
SSL1Q04673 RMA1YKL132C 1293 nt7.88□□□□□ -1.15
SSL1Q04673 BUB2YMR055C 921 nt7.88□□□□□ -1.15
SSL1Q04673 PDC6YGR087C 1692 nt7.88□□□□□ -1.15
SSL1Q04673 YIL177CYIL177C 5277 nt7.88□□□□□ -1.15
SSL1Q04673 snR86snR86 1004 nt7.87□□□□□ -1.15
SSL1Q04673 BMT5YIL096C 1011 nt7.87□□□□□ -1.15
SSL1Q04673 YJL009WYJL009W 327 nt7.87□□□□□ -1.15
SSL1Q04673 HXK1YFR053C 1458 nt7.87□□□□□ -1.15
SSL1Q04673 RRT14YIL127C 621 nt7.86□□□□□ -1.15
SSL1Q04673 OLA1YBR025C 1185 nt7.86□□□□□ -1.15
SSL1Q04673 YPL071CYPL071C 471 nt7.86□□□□□ -1.15
SSL1Q04673 TRP2YER090W 1524 nt7.86□□□□□ -1.15
SSL1Q04673 YLR072WYLR072W 2082 nt7.85□□□□□ -1.15
SSL1Q04673 HXT11YOL156W 1704 nt7.83□□□□□ -1.16
SSL1Q04673 MDL2YPL270W 2322 nt7.83□□□□□ -1.16
SSL1Q04673 PET18YCR020C 648 nt7.83□□□□□ -1.16
SSL1Q04673 EMC3YKL207W 762 nt7.83□□□□□ -1.16
SSL1Q04673 SDH8YBR269C 417 nt7.83□□□□□ -1.16
SSL1Q04673 MAM3YOL060C 2121 nt7.82□□□□□ -1.16
SSL1Q04673 MEP1YGR121C 1479 nt7.81□□□□□ -1.16
SSL1Q04673 YMR210WYMR210W 1350 nt7.81□□□□□ -1.16
SSL1Q04673 GRH1YDR517W 1119 nt7.8□□□□□ -1.16
SSL1Q04673 YER156CYER156C 1017 nt7.8□□□□□ -1.16
SSL1Q04673 ALD5YER073W 1563 nt7.8□□□□□ -1.16
SSL1Q04673 YNL165WYNL165W 1221 nt7.79□□□□□ -1.16
SSL1Q04673 ATG22YCL038C 1587 nt7.79□□□□□ -1.16
SSL1Q04673 RHO1YPR165W 630 nt7.78□□□□□ -1.16
SSL1Q04673 ADE5,7YGL234W 2409 nt7.77□□□□□ -1.17
SSL1Q04673 EDC2YER035W 438 nt7.77□□□□□ -1.17
SSL1Q04673 YJL211CYJL211C 444 nt7.77□□□□□ -1.17
SSL1Q04673 UTP6YDR449C 1323 nt7.77□□□□□ -1.17
SSL1Q04673 SWP1YMR149W 861 nt7.76□□□□□ -1.17
SSL1Q04673 BXI1YNL305C 894 nt7.76□□□□□ -1.17
SSL1Q04673 LRO1YNR008W 1986 nt7.75□□□□□ -1.17
SSL1Q04673 EEB1YPL095C 1371 nt7.75□□□□□ -1.17
SSL1Q04673 EHT1YBR177C 1356 nt7.75□□□□□ -1.17
SSL1Q04673 PUP3YER094C 618 nt7.75□□□□□ -1.17
SSL1Q04673 IDP3YNL009W 1263 nt7.75□□□□□ -1.17
SSL1Q04673 ECM10YEL030W 1935 nt7.75□□□□□ -1.17
SSL1Q04673 SRM1YGL097W 1449 nt7.75□□□□□ -1.17
SSL1Q04673 SHC1YER096W 1539 nt7.74□□□□□ -1.17
SSL1Q04673 YPT31YER031C 672 nt7.74□□□□□ -1.17
SSL1Q04673 HIS3YOR202W 663 nt7.74□□□□□ -1.17
SSL1Q04673 RPS6AYPL090C 711 nt7.74□□□□□ -1.17
SSL1Q04673 LEA1YPL213W 717 nt7.74□□□□□ -1.17
SSL1Q04673 RPS6BYBR181C 711 nt7.74□□□□□ -1.17
Retrieved 100 of 7,029 protein–RNA pairs in 6.4 ms