Protein–RNA interactions for Protein: Q03834

MSH6, DNA mismatch repair protein MSH6, yeastyeast

Predictions only

Length 1,242 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH6Q03834 LPD1YFL018C 1500 nt8.6□□□□□ -1.03
MSH6Q03834 YDR509WYDR509W 348 nt8.6□□□□□ -1.03
MSH6Q03834 SRP54YPR088C 1626 nt8.6□□□□□ -1.03
MSH6Q03834 FIT1YDR534C 1587 nt8.59□□□□□ -1.03
MSH6Q03834 YHP1YDR451C 1062 nt8.58□□□□□ -1.04
MSH6Q03834 FSH2YMR222C 672 nt8.58□□□□□ -1.04
MSH6Q03834 NAT5YOR253W 531 nt8.58□□□□□ -1.04
MSH6Q03834 MOD5YOR274W 1287 nt8.58□□□□□ -1.04
MSH6Q03834 AIM41YOR215C 558 nt8.57□□□□□ -1.04
MSH6Q03834 SAN1YDR143C 1833 nt8.57□□□□□ -1.04
MSH6Q03834 YIL177CYIL177C 5277 nt8.56□□□□□ -1.04
MSH6Q03834 ECM10YEL030W 1935 nt8.56□□□□□ -1.04
MSH6Q03834 SIR2YDL042C 1689 nt8.56□□□□□ -1.04
MSH6Q03834 tA(AGC)DtA(AGC)D 73 nt8.55□□□□□ -1.04
MSH6Q03834 tA(AGC)FtA(AGC)F 73 nt8.55□□□□□ -1.04
MSH6Q03834 tA(AGC)GtA(AGC)G 73 nt8.55□□□□□ -1.04
MSH6Q03834 tA(AGC)HtA(AGC)H 73 nt8.55□□□□□ -1.04
MSH6Q03834 tA(AGC)JtA(AGC)J 73 nt8.55□□□□□ -1.04
MSH6Q03834 tA(AGC)K1tA(AGC)K1 73 nt8.55□□□□□ -1.04
MSH6Q03834 tA(AGC)K2tA(AGC)K2 73 nt8.55□□□□□ -1.04
MSH6Q03834 tA(AGC)LtA(AGC)L 73 nt8.55□□□□□ -1.04
MSH6Q03834 tA(AGC)M1tA(AGC)M1 73 nt8.55□□□□□ -1.04
MSH6Q03834 tA(AGC)M2tA(AGC)M2 73 nt8.55□□□□□ -1.04
MSH6Q03834 tA(AGC)PtA(AGC)P 73 nt8.55□□□□□ -1.04
MSH6Q03834 YEL074WYEL074W 339 nt8.55□□□□□ -1.04
MSH6Q03834 PHB2YGR231C 933 nt8.55□□□□□ -1.04
MSH6Q03834 MRS4YKR052C 915 nt8.55□□□□□ -1.04
MSH6Q03834 REX2YLR059C 810 nt8.55□□□□□ -1.04
MSH6Q03834 AAT1YKL106W 1356 nt8.54□□□□□ -1.04
MSH6Q03834 GET2YER083C 858 nt8.54□□□□□ -1.04
MSH6Q03834 YKR012CYKR012C 378 nt8.54□□□□□ -1.04
MSH6Q03834 GAS1YMR307W 1680 nt8.53□□□□□ -1.04
MSH6Q03834 MRS3YJL133W 945 nt8.53□□□□□ -1.04
MSH6Q03834 ADH3YMR083W 1128 nt8.53□□□□□ -1.04
MSH6Q03834 YPT11YNL304W 1254 nt8.53□□□□□ -1.04
MSH6Q03834 SLG1YOR008C 1137 nt8.53□□□□□ -1.04
MSH6Q03834 THI3YDL080C 1830 nt8.52□□□□□ -1.04
MSH6Q03834 YCR049CYCR049C 447 nt8.52□□□□□ -1.05
MSH6Q03834 IPL1YPL209C 1104 nt8.52□□□□□ -1.05
MSH6Q03834 PTC6YCR079W 1329 nt8.52□□□□□ -1.05
MSH6Q03834 BNA3YJL060W 1335 nt8.52□□□□□ -1.05
MSH6Q03834 MLS1YNL117W 1665 nt8.51□□□□□ -1.05
MSH6Q03834 YCR099CYCR099C 468 nt8.51□□□□□ -1.05
MSH6Q03834 FLX1YIL134W 936 nt8.51□□□□□ -1.05
MSH6Q03834 EMC3YKL207W 762 nt8.51□□□□□ -1.05
MSH6Q03834 MIM1YOL026C 342 nt8.51□□□□□ -1.05
MSH6Q03834 tD(GUC)BtD(GUC)B 72 nt8.5□□□□□ -1.05
MSH6Q03834 tD(GUC)DtD(GUC)D 72 nt8.5□□□□□ -1.05
MSH6Q03834 tD(GUC)G1tD(GUC)G1 72 nt8.5□□□□□ -1.05
MSH6Q03834 tD(GUC)G2tD(GUC)G2 72 nt8.5□□□□□ -1.05
MSH6Q03834 tD(GUC)I1tD(GUC)I1 72 nt8.5□□□□□ -1.05
MSH6Q03834 tD(GUC)I2tD(GUC)I2 72 nt8.5□□□□□ -1.05
MSH6Q03834 tD(GUC)J1tD(GUC)J1 72 nt8.5□□□□□ -1.05
MSH6Q03834 tD(GUC)J2tD(GUC)J2 72 nt8.5□□□□□ -1.05
MSH6Q03834 tD(GUC)J3tD(GUC)J3 72 nt8.5□□□□□ -1.05
MSH6Q03834 tD(GUC)J4tD(GUC)J4 72 nt8.5□□□□□ -1.05
MSH6Q03834 tD(GUC)KtD(GUC)K 72 nt8.5□□□□□ -1.05
MSH6Q03834 tD(GUC)L1tD(GUC)L1 72 nt8.5□□□□□ -1.05
MSH6Q03834 tD(GUC)L2tD(GUC)L2 72 nt8.5□□□□□ -1.05
MSH6Q03834 tD(GUC)MtD(GUC)M 72 nt8.5□□□□□ -1.05
MSH6Q03834 tD(GUC)OtD(GUC)O 72 nt8.5□□□□□ -1.05
MSH6Q03834 MOB1YIL106W 945 nt8.5□□□□□ -1.05
MSH6Q03834 YMR316C-BYMR316C-B 309 nt8.5□□□□□ -1.05
MSH6Q03834 YRF1-3YGR296W 5580 nt8.49□□□□□ -1.05
MSH6Q03834 YRF1-6YNL339C 5580 nt8.49□□□□□ -1.05
MSH6Q03834 YRF1-7YPL283C 5580 nt8.49□□□□□ -1.05
MSH6Q03834 YCR025CYCR025C 411 nt8.49□□□□□ -1.05
MSH6Q03834 OCA1YNL099C 717 nt8.49□□□□□ -1.05
MSH6Q03834 PCL10YGL134W 1302 nt8.49□□□□□ -1.05
MSH6Q03834 NPL6YMR091C 1308 nt8.49□□□□□ -1.05
MSH6Q03834 TRP2YER090W 1524 nt8.48□□□□□ -1.05
MSH6Q03834 LSM12YHR121W 564 nt8.47□□□□□ -1.05
MSH6Q03834 CBK1YNL161W 2271 nt8.47□□□□□ -1.05
MSH6Q03834 HBS1YKR084C 1836 nt8.47□□□□□ -1.05
MSH6Q03834 YPL277CYPL277C 1464 nt8.46□□□□□ -1.05
MSH6Q03834 DUS3YLR401C 2007 nt8.46□□□□□ -1.05
MSH6Q03834 YJL009WYJL009W 327 nt8.46□□□□□ -1.06
MSH6Q03834 RSM7YJR113C 744 nt8.46□□□□□ -1.06
MSH6Q03834 SNU66YOR308C 1764 nt8.45□□□□□ -1.06
MSH6Q03834 FET5YFL041W 1869 nt8.45□□□□□ -1.06
MSH6Q03834 SDS24YBR214W 1584 nt8.45□□□□□ -1.06
MSH6Q03834 RRP1YDR087C 837 nt8.45□□□□□ -1.06
MSH6Q03834 YLR460CYLR460C 1131 nt8.45□□□□□ -1.06
MSH6Q03834 ADE2YOR128C 1716 nt8.45□□□□□ -1.06
MSH6Q03834 MAM3YOL060C 2121 nt8.45□□□□□ -1.06
MSH6Q03834 YMR306C-AYMR306C-A 390 nt8.44□□□□□ -1.06
MSH6Q03834 ENO1YGR254W 1314 nt8.44□□□□□ -1.06
MSH6Q03834 GNP1YDR508C 1992 nt8.44□□□□□ -1.06
MSH6Q03834 CYC3YAL039C 810 nt8.43□□□□□ -1.06
MSH6Q03834 YPR150WYPR150W 522 nt8.43□□□□□ -1.06
MSH6Q03834 AAC3YBR085W 924 nt8.43□□□□□ -1.06
MSH6Q03834 GAT1YFL021W 1533 nt8.43□□□□□ -1.06
MSH6Q03834 LYS20YDL182W 1287 nt8.42□□□□□ -1.06
MSH6Q03834 SWM1YDR260C 513 nt8.42□□□□□ -1.06
MSH6Q03834 YNL234WYNL234W 1281 nt8.42□□□□□ -1.06
MSH6Q03834 CWC25YNL245C 540 nt8.42□□□□□ -1.06
MSH6Q03834 VBA3YCL069W 1377 nt8.42□□□□□ -1.06
MSH6Q03834 TMS1YDR105C 1422 nt8.41□□□□□ -1.06
MSH6Q03834 TAF4YMR005W 1167 nt8.4□□□□□ -1.06
MSH6Q03834 COA2YPL189C-A 207 nt8.4□□□□□ -1.06
Retrieved 100 of 7,029 protein–RNA pairs in 7.2 ms