Protein–RNA interactions for Protein: P54860

UFD2, E4 ubiquitin-protein ligase UFD2, yeastyeast

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD2P54860 YMR210WYMR210W 1350 nt9.35□□□□□ -0.91
UFD2P54860 MCM5YLR274W 2328 nt9.34□□□□□ -0.91
UFD2P54860 BUD20YLR074C 501 nt9.33□□□□□ -0.92
UFD2P54860 HXT10YFL011W 1641 nt9.32□□□□□ -0.92
UFD2P54860 CAK1YFL029C 1107 nt9.32□□□□□ -0.92
UFD2P54860 MET22YOL064C 1074 nt9.32□□□□□ -0.92
UFD2P54860 OCH1YGL038C 1443 nt9.31□□□□□ -0.92
UFD2P54860 GRH1YDR517W 1119 nt9.31□□□□□ -0.92
UFD2P54860 CYT1YOR065W 930 nt9.31□□□□□ -0.92
UFD2P54860 CHS7YHR142W 951 nt9.3□□□□□ -0.92
UFD2P54860 RMA1YKL132C 1293 nt9.3□□□□□ -0.92
UFD2P54860 YBL095WYBL095W 813 nt9.3□□□□□ -0.92
UFD2P54860 AAC3YBR085W 924 nt9.3□□□□□ -0.92
UFD2P54860 INH1YDL181W 258 nt9.29□□□□□ -0.92
UFD2P54860 RRT14YIL127C 621 nt9.29□□□□□ -0.92
UFD2P54860 RNA170RNA170 169 nt9.28□□□□□ -0.92
UFD2P54860 TMS1YDR105C 1422 nt9.28□□□□□ -0.92
UFD2P54860 NPP1YCR026C 2229 nt9.27□□□□□ -0.93
UFD2P54860 YHR218WYHR218W 1812 nt9.27□□□□□ -0.93
UFD2P54860 AGP3YFL055W 1677 nt9.26□□□□□ -0.93
UFD2P54860 PDC6YGR087C 1692 nt9.26□□□□□ -0.93
UFD2P54860 SEM1YDR363W-A 270 nt9.26□□□□□ -0.93
UFD2P54860 YIR035CYIR035C 765 nt9.26□□□□□ -0.93
UFD2P54860 IDP3YNL009W 1263 nt9.26□□□□□ -0.93
UFD2P54860 YOR343CYOR343C 327 nt9.26□□□□□ -0.93
UFD2P54860 EEB1YPL095C 1371 nt9.25□□□□□ -0.93
UFD2P54860 UTR5YEL035C 501 nt9.25□□□□□ -0.93
UFD2P54860 YER156CYER156C 1017 nt9.25□□□□□ -0.93
UFD2P54860 YJL211CYJL211C 444 nt9.25□□□□□ -0.93
UFD2P54860 YMC2YBR104W 990 nt9.25□□□□□ -0.93
UFD2P54860 NPP2YEL016C 1482 nt9.25□□□□□ -0.93
UFD2P54860 HRA1HRA1 564 nt9.24□□□□□ -0.93
UFD2P54860 OLA1YBR025C 1185 nt9.24□□□□□ -0.93
UFD2P54860 ATG22YCL038C 1587 nt9.24□□□□□ -0.93
UFD2P54860 YJR149WYJR149W 1215 nt9.23□□□□□ -0.93
UFD2P54860 MRS4YKR052C 915 nt9.23□□□□□ -0.93
UFD2P54860 AST1YBL069W 1290 nt9.22□□□□□ -0.93
UFD2P54860 ADA2YDR448W 1305 nt9.22□□□□□ -0.93
UFD2P54860 MRP1YDR347W 966 nt9.21□□□□□ -0.94
UFD2P54860 MFT1YML062C 1179 nt9.21□□□□□ -0.94
UFD2P54860 BUB2YMR055C 921 nt9.21□□□□□ -0.94
UFD2P54860 BXI1YNL305C 894 nt9.21□□□□□ -0.94
UFD2P54860 RPS6AYPL090C 711 nt9.21□□□□□ -0.94
UFD2P54860 RPS6BYBR181C 711 nt9.21□□□□□ -0.94
UFD2P54860 HOS2YGL194C 1359 nt9.19□□□□□ -0.94
UFD2P54860 YRF1-2YER190W 5046 nt9.19□□□□□ -0.94
UFD2P54860 TPN1YGL186C 1740 nt9.18□□□□□ -0.94
UFD2P54860 YBR056WYBR056W 1506 nt9.18□□□□□ -0.94
UFD2P54860 GDH1YOR375C 1365 nt9.17□□□□□ -0.94
UFD2P54860 YJL009WYJL009W 327 nt9.17□□□□□ -0.94
UFD2P54860 AAT1YKL106W 1356 nt9.16□□□□□ -0.94
UFD2P54860 RHO1YPR165W 630 nt9.16□□□□□ -0.94
UFD2P54860 HXK1YFR053C 1458 nt9.15□□□□□ -0.94
UFD2P54860 ELP4YPL101W 1371 nt9.15□□□□□ -0.94
UFD2P54860 YPR084WYPR084W 1371 nt9.15□□□□□ -0.94
UFD2P54860 RPL12BYDR418W 498 nt9.15□□□□□ -0.94
UFD2P54860 YAL016C-AYAL016C-A 315 nt9.15□□□□□ -0.94
UFD2P54860 tL(UAA)B1tL(UAA)B1 84 nt9.14□□□□□ -0.95
UFD2P54860 tL(UAA)B2tL(UAA)B2 84 nt9.14□□□□□ -0.95
UFD2P54860 tL(UAA)DtL(UAA)D 84 nt9.14□□□□□ -0.95
UFD2P54860 SUP51tL(UAA)J 84 nt9.14□□□□□ -0.95
UFD2P54860 tL(UAA)KtL(UAA)K 84 nt9.14□□□□□ -0.95
UFD2P54860 tL(UAA)LtL(UAA)L 84 nt9.14□□□□□ -0.95
UFD2P54860 tL(UAA)NtL(UAA)N 84 nt9.14□□□□□ -0.95
UFD2P54860 ALD5YER073W 1563 nt9.13□□□□□ -0.95
UFD2P54860 YPT31YER031C 672 nt9.13□□□□□ -0.95
UFD2P54860 COX16YJL003W 357 nt9.13□□□□□ -0.95
UFD2P54860 TAD2YJL035C 753 nt9.13□□□□□ -0.95
UFD2P54860 URA8YJR103W 1737 nt9.12□□□□□ -0.95
UFD2P54860 snR86snR86 1004 nt9.12□□□□□ -0.95
UFD2P54860 MTO1YGL236C 2010 nt9.12□□□□□ -0.95
UFD2P54860 SHC1YER096W 1539 nt9.11□□□□□ -0.95
UFD2P54860 ATP2YJR121W 1536 nt9.11□□□□□ -0.95
UFD2P54860 MEP1YGR121C 1479 nt9.11□□□□□ -0.95
UFD2P54860 YMR206WYMR206W 942 nt9.11□□□□□ -0.95
UFD2P54860 PUP3YER094C 618 nt9.1□□□□□ -0.95
UFD2P54860 THI73YLR004C 1572 nt9.1□□□□□ -0.95
UFD2P54860 YJL107CYJL107C 1164 nt9.09□□□□□ -0.95
UFD2P54860 PZF1YPR186C 1290 nt9.09□□□□□ -0.95
UFD2P54860 GID7YCL039W 2238 nt9.09□□□□□ -0.95
UFD2P54860 SKG1YKR100C 1068 nt9.08□□□□□ -0.96
UFD2P54860 SCO2YBR024W 906 nt9.08□□□□□ -0.96
UFD2P54860 APM1YPL259C 1428 nt9.07□□□□□ -0.96
UFD2P54860 TDH1YJL052W 999 nt9.07□□□□□ -0.96
UFD2P54860 YMR147WYMR147W 672 nt9.07□□□□□ -0.96
UFD2P54860 ADE1YAR015W 921 nt9.06□□□□□ -0.96
UFD2P54860 YNR068CYNR068C 819 nt9.06□□□□□ -0.96
UFD2P54860 FET5YFL041W 1869 nt9.05□□□□□ -0.96
UFD2P54860 YIL168WYIL168W 384 nt9.04□□□□□ -0.96
UFD2P54860 YLR072WYLR072W 2082 nt9.04□□□□□ -0.96
UFD2P54860 LRO1YNR008W 1986 nt9.04□□□□□ -0.96
UFD2P54860 EHT1YBR177C 1356 nt9.03□□□□□ -0.96
UFD2P54860 THI6YPL214C 1623 nt9.03□□□□□ -0.96
UFD2P54860 TRP2YER090W 1524 nt9.03□□□□□ -0.96
UFD2P54860 RSM23YGL129C 1353 nt9.02□□□□□ -0.97
UFD2P54860 TOS1YBR162C 1368 nt9.02□□□□□ -0.97
UFD2P54860 EDC2YER035W 438 nt9.02□□□□□ -0.97
UFD2P54860 KAE1YKR038C 1161 nt9.02□□□□□ -0.97
UFD2P54860 TIM50YPL063W 1431 nt9.02□□□□□ -0.97
UFD2P54860 MLS1YNL117W 1665 nt9.01□□□□□ -0.97
Retrieved 100 of 7,029 protein–RNA pairs in 12.9 ms