Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 TMS1YDR105C 1422 nt9.31□□□□□ -0.92
RPT4P53549 COS10YNR075W 1125 nt9.31□□□□□ -0.92
RPT4P53549 PUP3YER094C 618 nt9.3□□□□□ -0.92
RPT4P53549 JHD1YER051W 1479 nt9.29□□□□□ -0.92
RPT4P53549 YLR358CYLR358C 564 nt9.29□□□□□ -0.92
RPT4P53549 BUB2YMR055C 921 nt9.29□□□□□ -0.92
RPT4P53549 LEU4YNL104C 1860 nt9.28□□□□□ -0.92
RPT4P53549 YDR467CYDR467C 327 nt9.28□□□□□ -0.92
RPT4P53549 TIM50YPL063W 1431 nt9.25□□□□□ -0.93
RPT4P53549 PUP2YGR253C 783 nt9.25□□□□□ -0.93
RPT4P53549 MDM35YKL053C-A 261 nt9.25□□□□□ -0.93
RPT4P53549 tE(CUC)DtE(CUC)D 72 nt9.24□□□□□ -0.93
RPT4P53549 tE(CUC)ItE(CUC)I 72 nt9.24□□□□□ -0.93
RPT4P53549 YML079WYML079W 606 nt9.24□□□□□ -0.93
RPT4P53549 YBR056WYBR056W 1506 nt9.24□□□□□ -0.93
RPT4P53549 NCA3YJL116C 1014 nt9.23□□□□□ -0.93
RPT4P53549 PMU1YKL128C 888 nt9.23□□□□□ -0.93
RPT4P53549 YHR218WYHR218W 1812 nt9.23□□□□□ -0.93
RPT4P53549 CPT1YNL130C 1182 nt9.22□□□□□ -0.93
RPT4P53549 YBL095WYBL095W 813 nt9.21□□□□□ -0.94
RPT4P53549 PNS1YOR161C 1620 nt9.2□□□□□ -0.94
RPT4P53549 PRE10YOR362C 867 nt9.2□□□□□ -0.94
RPT4P53549 SPR1YOR190W 1338 nt9.2□□□□□ -0.94
RPT4P53549 HXT8YJL214W 1710 nt9.19□□□□□ -0.94
RPT4P53549 DOC1YGL240W 753 nt9.18□□□□□ -0.94
RPT4P53549 MEP1YGR121C 1479 nt9.18□□□□□ -0.94
RPT4P53549 YJL009WYJL009W 327 nt9.18□□□□□ -0.94
RPT4P53549 MRS4YKR052C 915 nt9.18□□□□□ -0.94
RPT4P53549 APT1YML022W 564 nt9.18□□□□□ -0.94
RPT4P53549 ESBP6YNL125C 2022 nt9.18□□□□□ -0.94
RPT4P53549 YMC2YBR104W 990 nt9.18□□□□□ -0.94
RPT4P53549 PIH1YHR034C 1035 nt9.16□□□□□ -0.94
RPT4P53549 EHT1YBR177C 1356 nt9.14□□□□□ -0.95
RPT4P53549 YHL030W-AYHL030W-A 462 nt9.14□□□□□ -0.95
RPT4P53549 LRO1YNR008W 1986 nt9.13□□□□□ -0.95
RPT4P53549 TPN1YGL186C 1740 nt9.13□□□□□ -0.95
RPT4P53549 NPP2YEL016C 1482 nt9.11□□□□□ -0.95
RPT4P53549 SLM3YDL033C 1254 nt9.11□□□□□ -0.95
RPT4P53549 URA1YKL216W 945 nt9.11□□□□□ -0.95
RPT4P53549 LAT1YNL071W 1449 nt9.09□□□□□ -0.95
RPT4P53549 YAL019W-AYAL019W-A 570 nt9.09□□□□□ -0.95
RPT4P53549 ATP23YNR020C 813 nt9.09□□□□□ -0.95
RPT4P53549 CRN1YLR429W 1956 nt9.08□□□□□ -0.96
RPT4P53549 INH1YDL181W 258 nt9.08□□□□□ -0.96
RPT4P53549 snR86snR86 1004 nt9.07□□□□□ -0.96
RPT4P53549 HXT10YFL011W 1641 nt9.05□□□□□ -0.96
RPT4P53549 HSL7YBR133C 2484 nt9.05□□□□□ -0.96
RPT4P53549 AAT1YKL106W 1356 nt9.05□□□□□ -0.96
RPT4P53549 UME1YPL139C 1383 nt9.05□□□□□ -0.96
RPT4P53549 DMA2YNL116W 1569 nt9.04□□□□□ -0.96
RPT4P53549 RCF1YML030W 480 nt9.04□□□□□ -0.96
RPT4P53549 ARG7YMR062C 1326 nt9.04□□□□□ -0.96
RPT4P53549 YJL144WYJL144W 315 nt9.03□□□□□ -0.96
RPT4P53549 AGP3YFL055W 1677 nt9.02□□□□□ -0.97
RPT4P53549 YOX1YML027W 1158 nt9.02□□□□□ -0.97
RPT4P53549 YMR209CYMR209C 1374 nt9.01□□□□□ -0.97
RPT4P53549 DIP5YPL265W 1827 nt9□□□□□ -0.97
RPT4P53549 YGL114WYGL114W 2178 nt9□□□□□ -0.97
RPT4P53549 YBL111CYBL111C 2004 nt8.99□□□□□ -0.97
RPT4P53549 GID7YCL039W 2238 nt8.99□□□□□ -0.97
RPT4P53549 CYS3YAL012W 1185 nt8.99□□□□□ -0.97
RPT4P53549 ADH6YMR318C 1083 nt8.99□□□□□ -0.97
RPT4P53549 RIM8YGL045W 1629 nt8.98□□□□□ -0.97
RPT4P53549 NMA2YGR010W 1188 nt8.97□□□□□ -0.97
RPT4P53549 YJR142WYJR142W 1029 nt8.97□□□□□ -0.97
RPT4P53549 ERV2YPR037C 591 nt8.97□□□□□ -0.97
RPT4P53549 YPQ1YOL092W 927 nt8.96□□□□□ -0.98
RPT4P53549 MTO1YGL236C 2010 nt8.96□□□□□ -0.98
RPT4P53549 PTH2YBL057C 627 nt8.94□□□□□ -0.98
RPT4P53549 BUD31YCR063W 474 nt8.93□□□□□ -0.98
RPT4P53549 YOR111WYOR111W 699 nt8.93□□□□□ -0.98
RPT4P53549 MSI1YBR195C 1269 nt8.93□□□□□ -0.98
RPT4P53549 CKI1YLR133W 1749 nt8.93□□□□□ -0.98
RPT4P53549 YLR072WYLR072W 2082 nt8.93□□□□□ -0.98
RPT4P53549 CPR2YHR057C 618 nt8.92□□□□□ -0.98
RPT4P53549 PUS4YNL292W 1212 nt8.92□□□□□ -0.98
RPT4P53549 MBF1YOR298C-A 456 nt8.92□□□□□ -0.98
RPT4P53549 HEL2YDR266C 1920 nt8.92□□□□□ -0.98
RPT4P53549 WSC3YOL105C 1671 nt8.91□□□□□ -0.98
RPT4P53549 INO1YJL153C 1602 nt8.91□□□□□ -0.98
RPT4P53549 ALG7YBR243C 1347 nt8.91□□□□□ -0.98
RPT4P53549 RRP43YCR035C 1185 nt8.91□□□□□ -0.98
RPT4P53549 TES1YJR019C 1050 nt8.91□□□□□ -0.98
RPT4P53549 MCP1YOR228C 909 nt8.91□□□□□ -0.98
RPT4P53549 NPP1YCR026C 2229 nt8.9□□□□□ -0.98
RPT4P53549 STE3YKL178C 1413 nt8.9□□□□□ -0.98
RPT4P53549 ARO3YDR035W 1113 nt8.9□□□□□ -0.98
RPT4P53549 SFP1YLR403W 2052 nt8.9□□□□□ -0.99
RPT4P53549 MET2YNL277W 1461 nt8.89□□□□□ -0.99
RPT4P53549 MAS2YHR024C 1449 nt8.89□□□□□ -0.99
RPT4P53549 STS1YIR011C 960 nt8.89□□□□□ -0.99
RPT4P53549 YPL067CYPL067C 597 nt8.89□□□□□ -0.99
RPT4P53549 YNL295WYNL295W 1575 nt8.88□□□□□ -0.99
RPT4P53549 ZIM17YNL310C 525 nt8.88□□□□□ -0.99
RPT4P53549 CDC3YLR314C 1563 nt8.87□□□□□ -0.99
RPT4P53549 YGL081WYGL081W 963 nt8.87□□□□□ -0.99
RPT4P53549 CST26YBR042C 1194 nt8.87□□□□□ -0.99
RPT4P53549 SNP1YIL061C 903 nt8.86□□□□□ -0.99
RPT4P53549 SRY1YKL218C 981 nt8.86□□□□□ -0.99
RPT4P53549 NDE2YDL085W 1638 nt8.86□□□□□ -0.99
Retrieved 100 of 7,029 protein–RNA pairs in 40.7 ms