Protein–RNA interactions for Protein: P47061

VPS53, Vacuolar protein sorting-associated protein 53, yeastyeast

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS53P47061 KAE1YKR038C 1161 nt9.04□□□□□ -0.96
VPS53P47061 KGD2YDR148C 1392 nt9.03□□□□□ -0.96
VPS53P47061 COG1YGL223C 1254 nt9.02□□□□□ -0.97
VPS53P47061 RRT14YIL127C 621 nt9.02□□□□□ -0.97
VPS53P47061 KRR1YCL059C 951 nt9.01□□□□□ -0.97
VPS53P47061 YLR460CYLR460C 1131 nt9.01□□□□□ -0.97
VPS53P47061 RFC1YOR217W 2586 nt9□□□□□ -0.97
VPS53P47061 PET18YCR020C 648 nt9□□□□□ -0.97
VPS53P47061 PRE5YMR314W 705 nt9□□□□□ -0.97
VPS53P47061 SDH8YBR269C 417 nt9□□□□□ -0.97
VPS53P47061 FTH1YBR207W 1398 nt8.99□□□□□ -0.97
VPS53P47061 YER156CYER156C 1017 nt8.98□□□□□ -0.97
VPS53P47061 SBP1YHL034C 885 nt8.98□□□□□ -0.97
VPS53P47061 YNL067W-AYNL067W-A 147 nt8.98□□□□□ -0.97
VPS53P47061 MTO1YGL236C 2010 nt8.98□□□□□ -0.97
VPS53P47061 BAP3YDR046C 1815 nt8.98□□□□□ -0.97
VPS53P47061 GTB1YDR221W 2109 nt8.98□□□□□ -0.97
VPS53P47061 ELP4YPL101W 1371 nt8.98□□□□□ -0.97
VPS53P47061 GAS1YMR307W 1680 nt8.97□□□□□ -0.97
VPS53P47061 YPR084WYPR084W 1371 nt8.97□□□□□ -0.97
VPS53P47061 CAK1YFL029C 1107 nt8.96□□□□□ -0.98
VPS53P47061 YRF1-2YER190W 5046 nt8.96□□□□□ -0.98
VPS53P47061 PTC6YCR079W 1329 nt8.96□□□□□ -0.98
VPS53P47061 UTR5YEL035C 501 nt8.94□□□□□ -0.98
VPS53P47061 FUS3YBL016W 1062 nt8.94□□□□□ -0.98
VPS53P47061 RPC31YNL151C 756 nt8.94□□□□□ -0.98
VPS53P47061 CHS7YHR142W 951 nt8.93□□□□□ -0.98
VPS53P47061 ADE1YAR015W 921 nt8.93□□□□□ -0.98
VPS53P47061 YTH1YPR107C 627 nt8.93□□□□□ -0.98
VPS53P47061 tD(GUC)BtD(GUC)B 72 nt8.92□□□□□ -0.98
VPS53P47061 tD(GUC)DtD(GUC)D 72 nt8.92□□□□□ -0.98
VPS53P47061 tD(GUC)G1tD(GUC)G1 72 nt8.92□□□□□ -0.98
VPS53P47061 tD(GUC)G2tD(GUC)G2 72 nt8.92□□□□□ -0.98
VPS53P47061 tD(GUC)I1tD(GUC)I1 72 nt8.92□□□□□ -0.98
VPS53P47061 tD(GUC)I2tD(GUC)I2 72 nt8.92□□□□□ -0.98
VPS53P47061 tD(GUC)J1tD(GUC)J1 72 nt8.92□□□□□ -0.98
VPS53P47061 tD(GUC)J2tD(GUC)J2 72 nt8.92□□□□□ -0.98
VPS53P47061 tD(GUC)J3tD(GUC)J3 72 nt8.92□□□□□ -0.98
VPS53P47061 tD(GUC)J4tD(GUC)J4 72 nt8.92□□□□□ -0.98
VPS53P47061 tD(GUC)KtD(GUC)K 72 nt8.92□□□□□ -0.98
VPS53P47061 tD(GUC)L1tD(GUC)L1 72 nt8.92□□□□□ -0.98
VPS53P47061 tD(GUC)L2tD(GUC)L2 72 nt8.92□□□□□ -0.98
VPS53P47061 tD(GUC)MtD(GUC)M 72 nt8.92□□□□□ -0.98
VPS53P47061 tD(GUC)OtD(GUC)O 72 nt8.92□□□□□ -0.98
VPS53P47061 PET494YNR045W 1470 nt8.91□□□□□ -0.98
VPS53P47061 YDR306CYDR306C 1437 nt8.91□□□□□ -0.98
VPS53P47061 OCH1YGL038C 1443 nt8.91□□□□□ -0.98
VPS53P47061 MIM1YOL026C 342 nt8.91□□□□□ -0.98
VPS53P47061 SRN2YLR119W 642 nt8.9□□□□□ -0.98
VPS53P47061 HEM14YER014W 1620 nt8.9□□□□□ -0.99
VPS53P47061 YJL043WYJL043W 774 nt8.89□□□□□ -0.99
VPS53P47061 TDH1YJL052W 999 nt8.89□□□□□ -0.99
VPS53P47061 YJR149WYJR149W 1215 nt8.89□□□□□ -0.99
VPS53P47061 YPL247CYPL247C 1572 nt8.89□□□□□ -0.99
VPS53P47061 FET5YFL041W 1869 nt8.89□□□□□ -0.99
VPS53P47061 DPL1YDR294C 1770 nt8.89□□□□□ -0.99
VPS53P47061 GAL2YLR081W 1725 nt8.88□□□□□ -0.99
VPS53P47061 INH1YDL181W 258 nt8.88□□□□□ -0.99
VPS53P47061 OLA1YBR025C 1185 nt8.88□□□□□ -0.99
VPS53P47061 YMR316C-BYMR316C-B 309 nt8.86□□□□□ -0.99
VPS53P47061 RPS6AYPL090C 711 nt8.86□□□□□ -0.99
VPS53P47061 RPS6BYBR181C 711 nt8.86□□□□□ -0.99
VPS53P47061 NUP53YMR153W 1428 nt8.86□□□□□ -0.99
VPS53P47061 BMT5YIL096C 1011 nt8.85□□□□□ -0.99
VPS53P47061 MET22YOL064C 1074 nt8.85□□□□□ -0.99
VPS53P47061 GGA2YHR108W 1758 nt8.85□□□□□ -0.99
VPS53P47061 RSC4YKR008W 1878 nt8.85□□□□□ -0.99
VPS53P47061 UFD1YGR048W 1086 nt8.84□□□□□ -0.99
VPS53P47061 YIR018C-AYIR018C-A 138 nt8.84□□□□□ -0.99
VPS53P47061 YHM2YMR241W 945 nt8.84□□□□□ -0.99
VPS53P47061 LEU4YNL104C 1860 nt8.84□□□□□ -0.99
VPS53P47061 HBS1YKR084C 1836 nt8.84□□□□□ -0.99
VPS53P47061 THI3YDL080C 1830 nt8.83□□□□□ -1
VPS53P47061 BXI1YNL305C 894 nt8.83□□□□□ -1
VPS53P47061 YPT31YER031C 672 nt8.82□□□□□ -1
VPS53P47061 PDC6YGR087C 1692 nt8.81□□□□□ -1
VPS53P47061 YDR476CYDR476C 675 nt8.81□□□□□ -1
VPS53P47061 FIT1YDR534C 1587 nt8.81□□□□□ -1
VPS53P47061 ATP2YJR121W 1536 nt8.8□□□□□ -1
VPS53P47061 TOK1YJL093C 2076 nt8.8□□□□□ -1
VPS53P47061 NPP2YEL016C 1482 nt8.79□□□□□ -1
VPS53P47061 GPM1YKL152C 744 nt8.79□□□□□ -1
VPS53P47061 DUR3YHL016C 2208 nt8.78□□□□□ -1
VPS53P47061 YDR467CYDR467C 327 nt8.78□□□□□ -1
VPS53P47061 PUS7YOR243C 2031 nt8.77□□□□□ -1.01
VPS53P47061 YIR035CYIR035C 765 nt8.77□□□□□ -1.01
VPS53P47061 BNS1YGR230W 414 nt8.76□□□□□ -1.01
VPS53P47061 RNA170RNA170 169 nt8.76□□□□□ -1.01
VPS53P47061 DUS3YLR401C 2007 nt8.76□□□□□ -1.01
VPS53P47061 PUS5YLR165C 765 nt8.73□□□□□ -1.01
VPS53P47061 RPR1RPR1 369 nt8.73□□□□□ -1.01
VPS53P47061 AAC3YBR085W 924 nt8.73□□□□□ -1.01
VPS53P47061 TMS1YDR105C 1422 nt8.72□□□□□ -1.01
VPS53P47061 TRP2YER090W 1524 nt8.72□□□□□ -1.01
VPS53P47061 NAS6YGR232W 687 nt8.72□□□□□ -1.01
VPS53P47061 FAF1YIL019W 1041 nt8.72□□□□□ -1.01
VPS53P47061 REC114YMR133W 1287 nt8.72□□□□□ -1.01
VPS53P47061 YBL095WYBL095W 813 nt8.72□□□□□ -1.01
VPS53P47061 LPD1YFL018C 1500 nt8.71□□□□□ -1.01
VPS53P47061 tE(CUC)DtE(CUC)D 72 nt8.71□□□□□ -1.02
Retrieved 100 of 7,029 protein–RNA pairs in 11.7 ms