Protein–RNA interactions for Protein: P40073

SHO1, High osmolarity signaling protein SHO1, yeastyeast

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHO1P40073 MET22YOL064C 1074 nt7.19□□□□□ -1.26
SHO1P40073 OCH1YGL038C 1443 nt7.18□□□□□ -1.26
SHO1P40073 GCD11YER025W 1584 nt7.18□□□□□ -1.26
SHO1P40073 LSP1YPL004C 1026 nt7.18□□□□□ -1.26
SHO1P40073 PDC6YGR087C 1692 nt7.17□□□□□ -1.26
SHO1P40073 CAK1YFL029C 1107 nt7.17□□□□□ -1.26
SHO1P40073 ADE5,7YGL234W 2409 nt7.16□□□□□ -1.26
SHO1P40073 RNA170RNA170 169 nt7.16□□□□□ -1.26
SHO1P40073 OLA1YBR025C 1185 nt7.16□□□□□ -1.26
SHO1P40073 YMC2YBR104W 990 nt7.16□□□□□ -1.26
SHO1P40073 MRS4YKR052C 915 nt7.15□□□□□ -1.26
SHO1P40073 NPP2YEL016C 1482 nt7.15□□□□□ -1.27
SHO1P40073 LPD1YFL018C 1500 nt7.15□□□□□ -1.27
SHO1P40073 YER156CYER156C 1017 nt7.14□□□□□ -1.27
SHO1P40073 YMR210WYMR210W 1350 nt7.13□□□□□ -1.27
SHO1P40073 EMC3YKL207W 762 nt7.13□□□□□ -1.27
SHO1P40073 BUB2YMR055C 921 nt7.13□□□□□ -1.27
SHO1P40073 YOR072WYOR072W 315 nt7.13□□□□□ -1.27
SHO1P40073 YBR056WYBR056W 1506 nt7.11□□□□□ -1.27
SHO1P40073 PET18YCR020C 648 nt7.1□□□□□ -1.27
SHO1P40073 PAU21YOR394W 495 nt7.1□□□□□ -1.27
SHO1P40073 PAU22YPL282C 495 nt7.1□□□□□ -1.27
SHO1P40073 GRH1YDR517W 1119 nt7.09□□□□□ -1.27
SHO1P40073 YJR149WYJR149W 1215 nt7.09□□□□□ -1.27
SHO1P40073 MFT1YML062C 1179 nt7.09□□□□□ -1.27
SHO1P40073 ECM10YEL030W 1935 nt7.09□□□□□ -1.27
SHO1P40073 MRP1YDR347W 966 nt7.08□□□□□ -1.28
SHO1P40073 BUD20YLR074C 501 nt7.08□□□□□ -1.28
SHO1P40073 YOR343CYOR343C 327 nt7.08□□□□□ -1.28
SHO1P40073 AAT1YKL106W 1356 nt7.08□□□□□ -1.28
SHO1P40073 YJL009WYJL009W 327 nt7.07□□□□□ -1.28
SHO1P40073 HRA1HRA1 564 nt7.07□□□□□ -1.28
SHO1P40073 SNU66YOR308C 1764 nt7.07□□□□□ -1.28
SHO1P40073 NBA1YOL070C 1506 nt7.06□□□□□ -1.28
SHO1P40073 ADE2YOR128C 1716 nt7.06□□□□□ -1.28
SHO1P40073 YPR084WYPR084W 1371 nt7.06□□□□□ -1.28
SHO1P40073 ATP2YJR121W 1536 nt7.06□□□□□ -1.28
SHO1P40073 ADA2YDR448W 1305 nt7.05□□□□□ -1.28
SHO1P40073 snR86snR86 1004 nt7.05□□□□□ -1.28
SHO1P40073 YPT31YER031C 672 nt7.05□□□□□ -1.28
SHO1P40073 BXI1YNL305C 894 nt7.05□□□□□ -1.28
SHO1P40073 GDH1YOR375C 1365 nt7.05□□□□□ -1.28
SHO1P40073 PUP3YER094C 618 nt7.04□□□□□ -1.28
SHO1P40073 RHO1YPR165W 630 nt7.04□□□□□ -1.28
SHO1P40073 MAM3YOL060C 2121 nt7.04□□□□□ -1.28
SHO1P40073 YLR072WYLR072W 2082 nt7.04□□□□□ -1.28
SHO1P40073 MEX67YPL169C 1800 nt7.04□□□□□ -1.28
SHO1P40073 RPS6AYPL090C 711 nt7.03□□□□□ -1.28
SHO1P40073 RPS6BYBR181C 711 nt7.03□□□□□ -1.28
SHO1P40073 TAD2YJL035C 753 nt7.02□□□□□ -1.29
SHO1P40073 FET5YFL041W 1869 nt7.01□□□□□ -1.29
SHO1P40073 EHT1YBR177C 1356 nt7.01□□□□□ -1.29
SHO1P40073 RPL12BYDR418W 498 nt7.01□□□□□ -1.29
SHO1P40073 UTR5YEL035C 501 nt7.01□□□□□ -1.29
SHO1P40073 YMR206WYMR206W 942 nt7.01□□□□□ -1.29
SHO1P40073 UFD1YGR048W 1086 nt7□□□□□ -1.29
SHO1P40073 PMU1YKL128C 888 nt7□□□□□ -1.29
SHO1P40073 YAL016C-AYAL016C-A 315 nt6.99□□□□□ -1.29
SHO1P40073 LRO1YNR008W 1986 nt6.98□□□□□ -1.29
SHO1P40073 THI73YLR004C 1572 nt6.98□□□□□ -1.29
SHO1P40073 MEP1YGR121C 1479 nt6.98□□□□□ -1.29
SHO1P40073 TDH1YJL052W 999 nt6.97□□□□□ -1.29
SHO1P40073 HXT11YOL156W 1704 nt6.97□□□□□ -1.29
SHO1P40073 TIM50YPL063W 1431 nt6.97□□□□□ -1.29
SHO1P40073 TRP2YER090W 1524 nt6.96□□□□□ -1.29
SHO1P40073 ELP4YPL101W 1371 nt6.96□□□□□ -1.29
SHO1P40073 RCF1YML030W 480 nt6.96□□□□□ -1.3
SHO1P40073 PRE10YOR362C 867 nt6.96□□□□□ -1.3
SHO1P40073 SHC1YER096W 1539 nt6.96□□□□□ -1.3
SHO1P40073 FIT1YDR534C 1587 nt6.95□□□□□ -1.3
SHO1P40073 YHL030W-AYHL030W-A 462 nt6.94□□□□□ -1.3
SHO1P40073 HIS3YOR202W 663 nt6.94□□□□□ -1.3
SHO1P40073 HXT8YJL214W 1710 nt6.93□□□□□ -1.3
SHO1P40073 JHD1YER051W 1479 nt6.93□□□□□ -1.3
SHO1P40073 BUD31YCR063W 474 nt6.93□□□□□ -1.3
SHO1P40073 tL(UAA)B1tL(UAA)B1 84 nt6.93□□□□□ -1.3
SHO1P40073 tL(UAA)B2tL(UAA)B2 84 nt6.93□□□□□ -1.3
SHO1P40073 tL(UAA)DtL(UAA)D 84 nt6.93□□□□□ -1.3
SHO1P40073 SUP51tL(UAA)J 84 nt6.93□□□□□ -1.3
SHO1P40073 tL(UAA)KtL(UAA)K 84 nt6.93□□□□□ -1.3
SHO1P40073 tL(UAA)LtL(UAA)L 84 nt6.93□□□□□ -1.3
SHO1P40073 tL(UAA)NtL(UAA)N 84 nt6.93□□□□□ -1.3
SHO1P40073 ADE1YAR015W 921 nt6.93□□□□□ -1.3
SHO1P40073 NDE2YDL085W 1638 nt6.92□□□□□ -1.3
SHO1P40073 tD(GUC)BtD(GUC)B 72 nt6.92□□□□□ -1.3
SHO1P40073 tD(GUC)DtD(GUC)D 72 nt6.92□□□□□ -1.3
SHO1P40073 tD(GUC)G1tD(GUC)G1 72 nt6.92□□□□□ -1.3
SHO1P40073 tD(GUC)G2tD(GUC)G2 72 nt6.92□□□□□ -1.3
SHO1P40073 tD(GUC)I1tD(GUC)I1 72 nt6.92□□□□□ -1.3
SHO1P40073 tD(GUC)I2tD(GUC)I2 72 nt6.92□□□□□ -1.3
SHO1P40073 tD(GUC)J1tD(GUC)J1 72 nt6.92□□□□□ -1.3
SHO1P40073 tD(GUC)J2tD(GUC)J2 72 nt6.92□□□□□ -1.3
SHO1P40073 tD(GUC)J3tD(GUC)J3 72 nt6.92□□□□□ -1.3
SHO1P40073 tD(GUC)J4tD(GUC)J4 72 nt6.92□□□□□ -1.3
SHO1P40073 tD(GUC)KtD(GUC)K 72 nt6.92□□□□□ -1.3
SHO1P40073 tD(GUC)L1tD(GUC)L1 72 nt6.92□□□□□ -1.3
SHO1P40073 tD(GUC)L2tD(GUC)L2 72 nt6.92□□□□□ -1.3
SHO1P40073 tD(GUC)MtD(GUC)M 72 nt6.92□□□□□ -1.3
SHO1P40073 tD(GUC)OtD(GUC)O 72 nt6.92□□□□□ -1.3
SHO1P40073 TDA4YJR116W 840 nt6.92□□□□□ -1.3
Retrieved 100 of 7,029 protein–RNA pairs in 13.8 ms