Protein–RNA interactions for Protein: P39904

VPS52, Vacuolar protein sorting-associated protein 52, yeastyeast

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS52P39904 tD(GUC)OtD(GUC)O 72 nt7.49□□□□□ -1.21
VPS52P39904 CHS7YHR142W 951 nt7.49□□□□□ -1.21
VPS52P39904 RRT14YIL127C 621 nt7.49□□□□□ -1.21
VPS52P39904 LSP1YPL004C 1026 nt7.49□□□□□ -1.21
VPS52P39904 HRA1HRA1 564 nt7.47□□□□□ -1.21
VPS52P39904 EMC3YKL207W 762 nt7.47□□□□□ -1.21
VPS52P39904 YOR343CYOR343C 327 nt7.47□□□□□ -1.21
VPS52P39904 GRH1YDR517W 1119 nt7.46□□□□□ -1.22
VPS52P39904 OLA1YBR025C 1185 nt7.46□□□□□ -1.22
VPS52P39904 PAU21YOR394W 495 nt7.46□□□□□ -1.22
VPS52P39904 PAU22YPL282C 495 nt7.46□□□□□ -1.22
VPS52P39904 YMR210WYMR210W 1350 nt7.46□□□□□ -1.22
VPS52P39904 HBS1YKR084C 1836 nt7.45□□□□□ -1.22
VPS52P39904 YIR035CYIR035C 765 nt7.45□□□□□ -1.22
VPS52P39904 LPD1YFL018C 1500 nt7.45□□□□□ -1.22
VPS52P39904 FET5YFL041W 1869 nt7.45□□□□□ -1.22
VPS52P39904 CAK1YFL029C 1107 nt7.44□□□□□ -1.22
VPS52P39904 YBL095WYBL095W 813 nt7.44□□□□□ -1.22
VPS52P39904 OCH1YGL038C 1443 nt7.44□□□□□ -1.22
VPS52P39904 MRP1YDR347W 966 nt7.43□□□□□ -1.22
VPS52P39904 MET22YOL064C 1074 nt7.43□□□□□ -1.22
VPS52P39904 MAS1YLR163C 1389 nt7.43□□□□□ -1.22
VPS52P39904 RPL12BYDR418W 498 nt7.42□□□□□ -1.22
VPS52P39904 UFD1YGR048W 1086 nt7.42□□□□□ -1.22
VPS52P39904 MFT1YML062C 1179 nt7.42□□□□□ -1.22
VPS52P39904 YER156CYER156C 1017 nt7.4□□□□□ -1.22
VPS52P39904 YAL016C-AYAL016C-A 315 nt7.4□□□□□ -1.22
VPS52P39904 PDC6YGR087C 1692 nt7.39□□□□□ -1.23
VPS52P39904 TMS1YDR105C 1422 nt7.39□□□□□ -1.23
VPS52P39904 YPR084WYPR084W 1371 nt7.39□□□□□ -1.23
VPS52P39904 Q0010Q0010 387 nt7.39□□□□□ -1.23
VPS52P39904 AAT1YKL106W 1356 nt7.38□□□□□ -1.23
VPS52P39904 GDH1YOR375C 1365 nt7.38□□□□□ -1.23
VPS52P39904 NSG2YNL156C 900 nt7.38□□□□□ -1.23
VPS52P39904 ORT1YOR130C 879 nt7.38□□□□□ -1.23
VPS52P39904 AAC3YBR085W 924 nt7.38□□□□□ -1.23
VPS52P39904 YMC2YBR104W 990 nt7.38□□□□□ -1.23
VPS52P39904 TRP2YER090W 1524 nt7.37□□□□□ -1.23
VPS52P39904 DUR3YHL016C 2208 nt7.36□□□□□ -1.23
VPS52P39904 PET18YCR020C 648 nt7.36□□□□□ -1.23
VPS52P39904 YDR510C-AYDR510C-A 117 nt7.36□□□□□ -1.23
VPS52P39904 YPT31YER031C 672 nt7.36□□□□□ -1.23
VPS52P39904 BUB2YMR055C 921 nt7.36□□□□□ -1.23
VPS52P39904 ALR1YOL130W 2580 nt7.36□□□□□ -1.23
VPS52P39904 ADA2YDR448W 1305 nt7.35□□□□□ -1.23
VPS52P39904 MRS4YKR052C 915 nt7.35□□□□□ -1.23
VPS52P39904 HXT11YOL156W 1704 nt7.35□□□□□ -1.23
VPS52P39904 THI6YPL214C 1623 nt7.34□□□□□ -1.23
VPS52P39904 YLR072WYLR072W 2082 nt7.34□□□□□ -1.23
VPS52P39904 TAD2YJL035C 753 nt7.34□□□□□ -1.23
VPS52P39904 YJR149WYJR149W 1215 nt7.34□□□□□ -1.23
VPS52P39904 RNA170RNA170 169 nt7.34□□□□□ -1.23
VPS52P39904 YMR206WYMR206W 942 nt7.34□□□□□ -1.23
VPS52P39904 FIT1YDR534C 1587 nt7.33□□□□□ -1.24
VPS52P39904 MET8YBR213W 825 nt7.33□□□□□ -1.24
VPS52P39904 YLR173WYLR173W 1827 nt7.32□□□□□ -1.24
VPS52P39904 GNP1YDR508C 1992 nt7.32□□□□□ -1.24
VPS52P39904 YJR154WYJR154W 1041 nt7.32□□□□□ -1.24
VPS52P39904 snR86snR86 1004 nt7.31□□□□□ -1.24
VPS52P39904 YJL009WYJL009W 327 nt7.31□□□□□ -1.24
VPS52P39904 BXI1YNL305C 894 nt7.31□□□□□ -1.24
VPS52P39904 UTR5YEL035C 501 nt7.3□□□□□ -1.24
VPS52P39904 RPS6AYPL090C 711 nt7.3□□□□□ -1.24
VPS52P39904 RPS6BYBR181C 711 nt7.3□□□□□ -1.24
VPS52P39904 ATP2YJR121W 1536 nt7.3□□□□□ -1.24
VPS52P39904 RHO1YPR165W 630 nt7.29□□□□□ -1.24
VPS52P39904 snR4snR4 186 nt7.29□□□□□ -1.24
VPS52P39904 SRM1YGL097W 1449 nt7.28□□□□□ -1.24
VPS52P39904 ADE16YLR028C 1776 nt7.28□□□□□ -1.24
VPS52P39904 YBR056WYBR056W 1506 nt7.27□□□□□ -1.25
VPS52P39904 TDH1YJL052W 999 nt7.27□□□□□ -1.25
VPS52P39904 PMU1YKL128C 888 nt7.27□□□□□ -1.25
VPS52P39904 ELP4YPL101W 1371 nt7.27□□□□□ -1.25
VPS52P39904 tL(UAA)B1tL(UAA)B1 84 nt7.26□□□□□ -1.25
VPS52P39904 tL(UAA)B2tL(UAA)B2 84 nt7.26□□□□□ -1.25
VPS52P39904 tL(UAA)DtL(UAA)D 84 nt7.26□□□□□ -1.25
VPS52P39904 SUP51tL(UAA)J 84 nt7.26□□□□□ -1.25
VPS52P39904 tL(UAA)KtL(UAA)K 84 nt7.26□□□□□ -1.25
VPS52P39904 tL(UAA)LtL(UAA)L 84 nt7.26□□□□□ -1.25
VPS52P39904 tL(UAA)NtL(UAA)N 84 nt7.26□□□□□ -1.25
VPS52P39904 YOR268CYOR268C 399 nt7.26□□□□□ -1.25
VPS52P39904 DUS3YLR401C 2007 nt7.26□□□□□ -1.25
VPS52P39904 RTG2YGL252C 1767 nt7.25□□□□□ -1.25
VPS52P39904 EDC2YER035W 438 nt7.25□□□□□ -1.25
VPS52P39904 PUP3YER094C 618 nt7.25□□□□□ -1.25
VPS52P39904 THI73YLR004C 1572 nt7.25□□□□□ -1.25
VPS52P39904 MEP1YGR121C 1479 nt7.24□□□□□ -1.25
VPS52P39904 ABP1YCR088W 1779 nt7.23□□□□□ -1.25
VPS52P39904 MET30YIL046W 1923 nt7.23□□□□□ -1.25
VPS52P39904 YRF1-1YDR545W 5391 nt7.23□□□□□ -1.25
VPS52P39904 YRF1-5YLR467W 5391 nt7.23□□□□□ -1.25
VPS52P39904 YRF1-8YOR396W 5391 nt7.23□□□□□ -1.25
VPS52P39904 ADE1YAR015W 921 nt7.22□□□□□ -1.25
VPS52P39904 PRE10YOR362C 867 nt7.22□□□□□ -1.25
VPS52P39904 NUP53YMR153W 1428 nt7.21□□□□□ -1.25
VPS52P39904 YNL190WYNL190W 615 nt7.21□□□□□ -1.26
VPS52P39904 LEA1YPL213W 717 nt7.21□□□□□ -1.26
VPS52P39904 DIA4YHR011W 1341 nt7.21□□□□□ -1.26
VPS52P39904 FTH1YBR207W 1398 nt7.2□□□□□ -1.26
VPS52P39904 FUS3YBL016W 1062 nt7.2□□□□□ -1.26
Retrieved 100 of 7,029 protein–RNA pairs in 68.9 ms