Protein–RNA interactions for Protein: P34110

VPS35, Vacuolar protein sorting-associated protein 35, yeastyeast

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS35P34110 PZF1YPR186C 1290 nt8.96□□□□□ -0.98
VPS35P34110 PTC6YCR079W 1329 nt8.96□□□□□ -0.98
VPS35P34110 CBK1YNL161W 2271 nt8.96□□□□□ -0.98
VPS35P34110 TGA1tA(UGC)A 73 nt8.95□□□□□ -0.98
VPS35P34110 tA(UGC)EtA(UGC)E 73 nt8.95□□□□□ -0.98
VPS35P34110 tA(UGC)GtA(UGC)G 73 nt8.95□□□□□ -0.98
VPS35P34110 tA(UGC)LtA(UGC)L 73 nt8.95□□□□□ -0.98
VPS35P34110 tA(UGC)OtA(UGC)O 73 nt8.95□□□□□ -0.98
VPS35P34110 FCY1YPR062W 477 nt8.95□□□□□ -0.98
VPS35P34110 LEU4YNL104C 1860 nt8.94□□□□□ -0.98
VPS35P34110 COX16YJL003W 357 nt8.94□□□□□ -0.98
VPS35P34110 AST1YBL069W 1290 nt8.94□□□□□ -0.98
VPS35P34110 ARP10YDR106W 855 nt8.93□□□□□ -0.98
VPS35P34110 HOS2YGL194C 1359 nt8.93□□□□□ -0.98
VPS35P34110 MDL2YPL270W 2322 nt8.93□□□□□ -0.98
VPS35P34110 YLR460CYLR460C 1131 nt8.91□□□□□ -0.98
VPS35P34110 POP2YNR052C 1302 nt8.9□□□□□ -0.98
VPS35P34110 YPL108WYPL108W 507 nt8.9□□□□□ -0.98
VPS35P34110 GGA2YHR108W 1758 nt8.89□□□□□ -0.99
VPS35P34110 SEM1YDR363W-A 270 nt8.88□□□□□ -0.99
VPS35P34110 YOR072WYOR072W 315 nt8.88□□□□□ -0.99
VPS35P34110 HEM14YER014W 1620 nt8.87□□□□□ -0.99
VPS35P34110 SCO2YBR024W 906 nt8.87□□□□□ -0.99
VPS35P34110 NPP2YEL016C 1482 nt8.86□□□□□ -0.99
VPS35P34110 YPL277CYPL277C 1464 nt8.86□□□□□ -0.99
VPS35P34110 YMR147WYMR147W 672 nt8.86□□□□□ -0.99
VPS35P34110 YER152W-AYER152W-A 567 nt8.85□□□□□ -0.99
VPS35P34110 YMR166CYMR166C 1107 nt8.85□□□□□ -0.99
VPS35P34110 AAC3YBR085W 924 nt8.85□□□□□ -0.99
VPS35P34110 INH1YDL181W 258 nt8.84□□□□□ -0.99
VPS35P34110 tE(CUC)DtE(CUC)D 72 nt8.84□□□□□ -0.99
VPS35P34110 tE(CUC)ItE(CUC)I 72 nt8.84□□□□□ -0.99
VPS35P34110 YDR467CYDR467C 327 nt8.84□□□□□ -0.99
VPS35P34110 CHS7YHR142W 951 nt8.84□□□□□ -0.99
VPS35P34110 FET5YFL041W 1869 nt8.83□□□□□ -1
VPS35P34110 APM1YPL259C 1428 nt8.83□□□□□ -1
VPS35P34110 GPM1YKL152C 744 nt8.83□□□□□ -1
VPS35P34110 LSP1YPL004C 1026 nt8.83□□□□□ -1
VPS35P34110 MGM101YJR144W 810 nt8.82□□□□□ -1
VPS35P34110 OLA1YBR025C 1185 nt8.82□□□□□ -1
VPS35P34110 YRF1-3YGR296W 5580 nt8.82□□□□□ -1
VPS35P34110 YRF1-6YNL339C 5580 nt8.82□□□□□ -1
VPS35P34110 YRF1-7YPL283C 5580 nt8.82□□□□□ -1
VPS35P34110 MEX67YPL169C 1800 nt8.82□□□□□ -1
VPS35P34110 NBA1YOL070C 1506 nt8.81□□□□□ -1
VPS35P34110 GNP1YDR508C 1992 nt8.81□□□□□ -1
VPS35P34110 YMR316C-BYMR316C-B 309 nt8.81□□□□□ -1
VPS35P34110 RRT14YIL127C 621 nt8.8□□□□□ -1
VPS35P34110 THI3YDL080C 1830 nt8.8□□□□□ -1
VPS35P34110 NPL6YMR091C 1308 nt8.8□□□□□ -1
VPS35P34110 YCR049CYCR049C 447 nt8.79□□□□□ -1
VPS35P34110 YIR035CYIR035C 765 nt8.79□□□□□ -1
VPS35P34110 YJL107CYJL107C 1164 nt8.79□□□□□ -1
VPS35P34110 YJL160CYJL160C 864 nt8.78□□□□□ -1
VPS35P34110 ALR1YOL130W 2580 nt8.78□□□□□ -1
VPS35P34110 TPN1YGL186C 1740 nt8.77□□□□□ -1
VPS35P34110 EMC3YKL207W 762 nt8.77□□□□□ -1.01
VPS35P34110 BUD20YLR074C 501 nt8.77□□□□□ -1.01
VPS35P34110 YBL095WYBL095W 813 nt8.77□□□□□ -1.01
VPS35P34110 YMC2YBR104W 990 nt8.77□□□□□ -1.01
VPS35P34110 YMR210WYMR210W 1350 nt8.76□□□□□ -1.01
VPS35P34110 CAK1YFL029C 1107 nt8.76□□□□□ -1.01
VPS35P34110 HDA1YNL021W 2121 nt8.76□□□□□ -1.01
VPS35P34110 OCH1YGL038C 1443 nt8.75□□□□□ -1.01
VPS35P34110 MET22YOL064C 1074 nt8.75□□□□□ -1.01
VPS35P34110 YIL177CYIL177C 5277 nt8.74□□□□□ -1.01
VPS35P34110 GRH1YDR517W 1119 nt8.74□□□□□ -1.01
VPS35P34110 YNR068CYNR068C 819 nt8.74□□□□□ -1.01
VPS35P34110 TMS1YDR105C 1422 nt8.73□□□□□ -1.01
VPS35P34110 SIR2YDL042C 1689 nt8.73□□□□□ -1.01
VPS35P34110 MAK32YCR019W 1092 nt8.73□□□□□ -1.01
VPS35P34110 HRA1HRA1 564 nt8.73□□□□□ -1.01
VPS35P34110 MRS4YKR052C 915 nt8.73□□□□□ -1.01
VPS35P34110 MFT1YML062C 1179 nt8.73□□□□□ -1.01
VPS35P34110 RSM23YGL129C 1353 nt8.73□□□□□ -1.01
VPS35P34110 TRP2YER090W 1524 nt8.72□□□□□ -1.01
VPS35P34110 YPR084WYPR084W 1371 nt8.72□□□□□ -1.01
VPS35P34110 SKG1YKR100C 1068 nt8.71□□□□□ -1.02
VPS35P34110 OCA1YNL099C 717 nt8.71□□□□□ -1.02
VPS35P34110 EHD3YDR036C 1503 nt8.7□□□□□ -1.02
VPS35P34110 LPD1YFL018C 1500 nt8.7□□□□□ -1.02
VPS35P34110 TOM71YHR117W 1920 nt8.7□□□□□ -1.02
VPS35P34110 YPT31YER031C 672 nt8.7□□□□□ -1.02
VPS35P34110 YJR149WYJR149W 1215 nt8.7□□□□□ -1.02
VPS35P34110 BUB2YMR055C 921 nt8.7□□□□□ -1.02
VPS35P34110 YOR343CYOR343C 327 nt8.7□□□□□ -1.02
VPS35P34110 PDC6YGR087C 1692 nt8.69□□□□□ -1.02
VPS35P34110 tD(GUC)BtD(GUC)B 72 nt8.69□□□□□ -1.02
VPS35P34110 tD(GUC)DtD(GUC)D 72 nt8.69□□□□□ -1.02
VPS35P34110 tD(GUC)G1tD(GUC)G1 72 nt8.69□□□□□ -1.02
VPS35P34110 tD(GUC)G2tD(GUC)G2 72 nt8.69□□□□□ -1.02
VPS35P34110 tD(GUC)I1tD(GUC)I1 72 nt8.69□□□□□ -1.02
VPS35P34110 tD(GUC)I2tD(GUC)I2 72 nt8.69□□□□□ -1.02
VPS35P34110 tD(GUC)J1tD(GUC)J1 72 nt8.69□□□□□ -1.02
VPS35P34110 tD(GUC)J2tD(GUC)J2 72 nt8.69□□□□□ -1.02
VPS35P34110 tD(GUC)J3tD(GUC)J3 72 nt8.69□□□□□ -1.02
VPS35P34110 tD(GUC)J4tD(GUC)J4 72 nt8.69□□□□□ -1.02
VPS35P34110 tD(GUC)KtD(GUC)K 72 nt8.69□□□□□ -1.02
VPS35P34110 tD(GUC)L1tD(GUC)L1 72 nt8.69□□□□□ -1.02
VPS35P34110 tD(GUC)L2tD(GUC)L2 72 nt8.69□□□□□ -1.02
Retrieved 100 of 7,029 protein–RNA pairs in 40.1 ms