Protein–RNA interactions for Protein: P33336

SKN1, Beta-glucan synthesis-associated protein SKN1, yeastyeast

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SKN1P33336 tD(GUC)J3tD(GUC)J3 72 nt7.65□□□□□ -1.18
SKN1P33336 tD(GUC)J4tD(GUC)J4 72 nt7.65□□□□□ -1.18
SKN1P33336 tD(GUC)KtD(GUC)K 72 nt7.65□□□□□ -1.18
SKN1P33336 tD(GUC)L1tD(GUC)L1 72 nt7.65□□□□□ -1.18
SKN1P33336 tD(GUC)L2tD(GUC)L2 72 nt7.65□□□□□ -1.18
SKN1P33336 tD(GUC)MtD(GUC)M 72 nt7.65□□□□□ -1.18
SKN1P33336 tD(GUC)OtD(GUC)O 72 nt7.65□□□□□ -1.18
SKN1P33336 YER156CYER156C 1017 nt7.65□□□□□ -1.18
SKN1P33336 tL(UAA)B1tL(UAA)B1 84 nt7.65□□□□□ -1.18
SKN1P33336 tL(UAA)B2tL(UAA)B2 84 nt7.65□□□□□ -1.18
SKN1P33336 tL(UAA)DtL(UAA)D 84 nt7.65□□□□□ -1.18
SKN1P33336 SUP51tL(UAA)J 84 nt7.65□□□□□ -1.18
SKN1P33336 tL(UAA)KtL(UAA)K 84 nt7.65□□□□□ -1.18
SKN1P33336 tL(UAA)LtL(UAA)L 84 nt7.65□□□□□ -1.18
SKN1P33336 tL(UAA)NtL(UAA)N 84 nt7.65□□□□□ -1.18
SKN1P33336 YMR316C-BYMR316C-B 309 nt7.65□□□□□ -1.18
SKN1P33336 MET22YOL064C 1074 nt7.65□□□□□ -1.18
SKN1P33336 YOR268CYOR268C 399 nt7.65□□□□□ -1.18
SKN1P33336 THI3YDL080C 1830 nt7.64□□□□□ -1.19
SKN1P33336 GPM1YKL152C 744 nt7.63□□□□□ -1.19
SKN1P33336 YBL095WYBL095W 813 nt7.63□□□□□ -1.19
SKN1P33336 MIM1YOL026C 342 nt7.63□□□□□ -1.19
SKN1P33336 OLA1YBR025C 1185 nt7.63□□□□□ -1.19
SKN1P33336 ELP4YPL101W 1371 nt7.62□□□□□ -1.19
SKN1P33336 HBS1YKR084C 1836 nt7.62□□□□□ -1.19
SKN1P33336 EDC2YER035W 438 nt7.62□□□□□ -1.19
SKN1P33336 TAD2YJL035C 753 nt7.62□□□□□ -1.19
SKN1P33336 YJR149WYJR149W 1215 nt7.62□□□□□ -1.19
SKN1P33336 MEX67YPL169C 1800 nt7.62□□□□□ -1.19
SKN1P33336 YPR084WYPR084W 1371 nt7.61□□□□□ -1.19
SKN1P33336 PDC6YGR087C 1692 nt7.61□□□□□ -1.19
SKN1P33336 RPS6AYPL090C 711 nt7.61□□□□□ -1.19
SKN1P33336 RPS6BYBR181C 711 nt7.61□□□□□ -1.19
SKN1P33336 MTO1YGL236C 2010 nt7.61□□□□□ -1.19
SKN1P33336 MCM5YLR274W 2328 nt7.6□□□□□ -1.19
SKN1P33336 BXI1YNL305C 894 nt7.6□□□□□ -1.19
SKN1P33336 HXT11YOL156W 1704 nt7.59□□□□□ -1.19
SKN1P33336 KAE1YKR038C 1161 nt7.59□□□□□ -1.19
SKN1P33336 RNA170RNA170 169 nt7.59□□□□□ -1.19
SKN1P33336 TRP2YER090W 1524 nt7.58□□□□□ -1.2
SKN1P33336 YIR035CYIR035C 765 nt7.58□□□□□ -1.2
SKN1P33336 THI6YPL214C 1623 nt7.58□□□□□ -1.2
SKN1P33336 URA8YJR103W 1737 nt7.58□□□□□ -1.2
SKN1P33336 Q0010Q0010 387 nt7.57□□□□□ -1.2
SKN1P33336 ADE1YAR015W 921 nt7.56□□□□□ -1.2
SKN1P33336 YMR206WYMR206W 942 nt7.56□□□□□ -1.2
SKN1P33336 MFG1YDL233W 1377 nt7.56□□□□□ -1.2
SKN1P33336 YPT31YER031C 672 nt7.55□□□□□ -1.2
SKN1P33336 TDH1YJL052W 999 nt7.55□□□□□ -1.2
SKN1P33336 AAC3YBR085W 924 nt7.55□□□□□ -1.2
SKN1P33336 TOS1YBR162C 1368 nt7.55□□□□□ -1.2
SKN1P33336 TMS1YDR105C 1422 nt7.54□□□□□ -1.2
SKN1P33336 RSC4YKR008W 1878 nt7.54□□□□□ -1.2
SKN1P33336 DUR3YHL016C 2208 nt7.54□□□□□ -1.2
SKN1P33336 ORT1YOR130C 879 nt7.54□□□□□ -1.2
SKN1P33336 YMC2YBR104W 990 nt7.54□□□□□ -1.2
SKN1P33336 AAT1YKL106W 1356 nt7.54□□□□□ -1.2
SKN1P33336 ATP2YJR121W 1536 nt7.53□□□□□ -1.2
SKN1P33336 YLR072WYLR072W 2082 nt7.52□□□□□ -1.21
SKN1P33336 RHO1YPR165W 630 nt7.52□□□□□ -1.21
SKN1P33336 YJL043WYJL043W 774 nt7.51□□□□□ -1.21
SKN1P33336 BUB2YMR055C 921 nt7.51□□□□□ -1.21
SKN1P33336 NME1NME1 340 nt7.51□□□□□ -1.21
SKN1P33336 FUS3YBL016W 1062 nt7.5□□□□□ -1.21
SKN1P33336 NUP53YMR153W 1428 nt7.5□□□□□ -1.21
SKN1P33336 GTB1YDR221W 2109 nt7.49□□□□□ -1.21
SKN1P33336 MRS4YKR052C 915 nt7.49□□□□□ -1.21
SKN1P33336 SRM1YGL097W 1449 nt7.49□□□□□ -1.21
SKN1P33336 PET494YNR045W 1470 nt7.49□□□□□ -1.21
SKN1P33336 MDL2YPL270W 2322 nt7.49□□□□□ -1.21
SKN1P33336 YIL168WYIL168W 384 nt7.48□□□□□ -1.21
SKN1P33336 YJL009WYJL009W 327 nt7.48□□□□□ -1.21
SKN1P33336 THI73YLR004C 1572 nt7.47□□□□□ -1.21
SKN1P33336 TPN1YGL186C 1740 nt7.47□□□□□ -1.21
SKN1P33336 PUP3YER094C 618 nt7.46□□□□□ -1.22
SKN1P33336 BAP3YDR046C 1815 nt7.45□□□□□ -1.22
SKN1P33336 YJR154WYJR154W 1041 nt7.45□□□□□ -1.22
SKN1P33336 YBR056WYBR056W 1506 nt7.45□□□□□ -1.22
SKN1P33336 GAL2YLR081W 1725 nt7.44□□□□□ -1.22
SKN1P33336 SHC1YER096W 1539 nt7.44□□□□□ -1.22
SKN1P33336 snR86snR86 1004 nt7.44□□□□□ -1.22
SKN1P33336 PRE5YMR314W 705 nt7.44□□□□□ -1.22
SKN1P33336 snR4snR4 186 nt7.44□□□□□ -1.22
SKN1P33336 HOG1YLR113W 1308 nt7.44□□□□□ -1.22
SKN1P33336 YDR306CYDR306C 1437 nt7.43□□□□□ -1.22
SKN1P33336 PMU1YKL128C 888 nt7.42□□□□□ -1.22
SKN1P33336 DIA4YHR011W 1341 nt7.41□□□□□ -1.22
SKN1P33336 FTH1YBR207W 1398 nt7.41□□□□□ -1.22
SKN1P33336 DUS3YLR401C 2007 nt7.4□□□□□ -1.22
SKN1P33336 YDR476CYDR476C 675 nt7.4□□□□□ -1.22
SKN1P33336 LEA1YPL213W 717 nt7.4□□□□□ -1.22
SKN1P33336 SDH8YBR269C 417 nt7.4□□□□□ -1.22
SKN1P33336 TIM50YPL063W 1431 nt7.4□□□□□ -1.22
SKN1P33336 JHD1YER051W 1479 nt7.4□□□□□ -1.22
SKN1P33336 FIT1YDR534C 1587 nt7.4□□□□□ -1.22
SKN1P33336 ADE16YLR028C 1776 nt7.4□□□□□ -1.23
SKN1P33336 TOK1YJL093C 2076 nt7.39□□□□□ -1.23
SKN1P33336 MEP1YGR121C 1479 nt7.39□□□□□ -1.23
SKN1P33336 PRE10YOR362C 867 nt7.39□□□□□ -1.23
SKN1P33336 YRF1-1YDR545W 5391 nt7.38□□□□□ -1.23
Retrieved 100 of 7,029 protein–RNA pairs in 14.7 ms