Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 MLH1-201ENST00000231790 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.561e-6■■■■■ 42.2
U2AF2P26368 MLH1-222ENST00000539477 2366 ntTSL 2 BASIC10.51□□□□□ -0.731e-6■■■■■ 42.2
U2AF2P26368 MLH1-216ENST00000458205 2608 ntTSL 1 (best) BASIC10.18□□□□□ -0.781e-6■■■■■ 42.2
U2AF2P26368 MLH1-213ENST00000456676 2230 ntTSL 1 (best)8.54□□□□□ -1.041e-6■■■■■ 42.2
U2AF2P26368 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC7.06□□□□□ -1.281e-6■■■■■ 42.2
U2AF2P26368 MLH1-223ENST00000616768 721 ntTSL 25.4□□□□□ -1.541e-6■■■■■ 42.2
U2AF2P26368 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.87□□□□□ -1.631e-6■■■■■ 42.2
U2AF2P26368 MLH1-203ENST00000413740 342 ntTSL 1 (best)4.85□□□□□ -1.631e-6■■■■■ 42.2
U2AF2P26368 MLH1-210ENST00000450420 233 ntTSL 1 (best)3.82□□□□□ -1.81e-6■■■■■ 42.2
U2AF2P26368 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.159e-15■■■■■ 42.2
U2AF2P26368 PPME1-208ENST00000543525 1928 ntTSL 1 (best)15.58■□□□□ 0.089e-15■■■■■ 42.2
U2AF2P26368 PPME1-202ENST00000398427 2496 ntTSL 1 (best) BASIC13.04□□□□□ -0.329e-15■■■■■ 42.2
U2AF2P26368 PPME1-203ENST00000535205 636 ntTSL 27.9□□□□□ -1.149e-15■■■■■ 42.2
U2AF2P26368 CAPZA2-202ENST00000414148 360 ntTSL 518.9■□□□□ 0.625e-9■■■■■ 42.2
U2AF2P26368 CAPZA2-201ENST00000361183 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.455e-9■■■■■ 42.2
U2AF2P26368 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.74□□□□□ -1.815e-9■■■■■ 42.2
U2AF2P26368 CAPZA2-205ENST00000449080 814 ntTSL 52.65□□□□□ -1.995e-9■■■■■ 42.2
U2AF2P26368 CAPZA2-204ENST00000426421 1214 ntTSL 52.53□□□□□ -25e-9■■■■■ 42.2
U2AF2P26368 CAPZA2-203ENST00000417431 517 ntTSL 32.41□□□□□ -2.025e-9■■■■■ 42.2
U2AF2P26368 CAPZA2-208ENST00000464669 898 ntTSL 21.99□□□□□ -2.095e-9■■■■■ 42.2
U2AF2P26368 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.82□□□□□ -2.125e-9■■■■■ 42.2
U2AF2P26368 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.81e-7■■■■■ 42.2
U2AF2P26368 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.41e-7■■■■■ 42.2
U2AF2P26368 EIF5-205ENST00000558506 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.161e-7■■■■■ 42.2
U2AF2P26368 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.686e-7■■■■■ 42.2
U2AF2P26368 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.676e-7■■■■■ 42.2
U2AF2P26368 AFTPH-207ENST00000498706 4674 ntTSL 1 (best)7.45□□□□□ -1.226e-7■■■■■ 42.2
U2AF2P26368 UBR5-203ENST00000518145 598 ntTSL 48.03□□□□□ -1.122e-13■■■■■ 42.2
U2AF2P26368 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.048e-10■■■■■ 42.1
U2AF2P26368 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.82■□□□□ 0.925e-7■■■■■ 42.1
U2AF2P26368 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.625e-7■■■■■ 42.1
U2AF2P26368 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.475e-7■■■■■ 42.1
U2AF2P26368 OCIAD1-205ENST00000444354 1756 ntTSL 3 BASIC12.97□□□□□ -0.335e-7■■■■■ 42.1
U2AF2P26368 OCIAD1-203ENST00000396448 1306 ntTSL 1 (best) BASIC12.86□□□□□ -0.355e-7■■■■■ 42.1
U2AF2P26368 OCIAD1-226ENST00000513391 1288 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.365e-7■■■■■ 42.1
U2AF2P26368 OCIAD1-201ENST00000264312 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.445e-7■■■■■ 42.1
U2AF2P26368 OCIAD1-210ENST00000506801 571 ntTSL 2 BASIC10.59□□□□□ -0.715e-7■■■■■ 42.1
U2AF2P26368 OCIAD1-225ENST00000512981 1209 ntTSL 410.37□□□□□ -0.755e-7■■■■■ 42.1
U2AF2P26368 OCIAD1-209ENST00000505922 555 ntTSL 58.37□□□□□ -1.075e-7■■■■■ 42.1
U2AF2P26368 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC7.11□□□□□ -1.275e-7■■■■■ 42.1
U2AF2P26368 OCIAD1-207ENST00000503016 720 ntTSL 34.97□□□□□ -1.615e-7■■■■■ 42.1
U2AF2P26368 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.282e-11■■■■■ 42.1
U2AF2P26368 PHTF2-203ENST00000307305 4793 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.282e-11■■■■■ 42.1
U2AF2P26368 PHTF2-205ENST00000416283 5198 ntTSL 5 BASIC11.82□□□□□ -0.522e-11■■■■■ 42.1
U2AF2P26368 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.88□□□□□ -1.792e-11■■■■■ 42.1
U2AF2P26368 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.48□□□□□ -1.852e-11■■■■■ 42.1
U2AF2P26368 NUP160-204ENST00000527126 527 ntTSL 210.22□□□□□ -0.776e-46■■■■■ 42
U2AF2P26368 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 13e-11■■■■■ 42
U2AF2P26368 BTN2A1-206ENST00000493173 551 ntTSL 410.95□□□□□ -0.666e-10■■■■■ 41.9
U2AF2P26368 DHX16-204ENST00000480966 797 ntTSL 210.81□□□□□ -0.681e-8■■■■■ 41.8
U2AF2P26368 AFDN-221ENST00000511637 5999 ntTSL 1 (best)11.03□□□□□ -0.644e-8■■■■■ 41.7
U2AF2P26368 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.517e-15■■■■■ 41.7
U2AF2P26368 ALDH1A2-204ENST00000537372 3700 ntTSL 2 BASIC15.1■□□□□ 0.017e-15■■■■■ 41.7
U2AF2P26368 ALDH1A2-207ENST00000558231 1664 ntTSL 2 BASIC12.3□□□□□ -0.447e-15■■■■■ 41.7
U2AF2P26368 ALDH1A2-203ENST00000430119 3049 ntTSL 212.19□□□□□ -0.467e-15■■■■■ 41.7
U2AF2P26368 ALDH1A2-202ENST00000347587 3297 ntTSL 1 (best) BASIC12.09□□□□□ -0.477e-15■■■■■ 41.7
U2AF2P26368 ALDH1A2-223ENST00000560923 475 ntTSL 311.4□□□□□ -0.587e-15■■■■■ 41.7
U2AF2P26368 ALDH1A2-217ENST00000559517 1468 ntTSL 1 (best) BASIC11.2□□□□□ -0.627e-15■■■■■ 41.7
U2AF2P26368 ALDH1A2-215ENST00000559266 545 ntTSL 410.68□□□□□ -0.77e-15■■■■■ 41.7
U2AF2P26368 NLK-201ENST00000407008 4047 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.925e-10■■■■■ 41.6
U2AF2P26368 NLK-202ENST00000496808 1702 ntTSL 25.97□□□□□ -1.455e-10■■■■■ 41.6
U2AF2P26368 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC21.95■■□□□ 1.19e-8■■■■■ 41.6
U2AF2P26368 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.929e-8■■■■■ 41.6
U2AF2P26368 ARNT-204ENST00000471844 3703 ntTSL 214.3□□□□□ -0.129e-8■■■■■ 41.6
U2AF2P26368 ARNT-208ENST00000505755 2427 ntTSL 2 BASIC10.73□□□□□ -0.699e-8■■■■■ 41.6
U2AF2P26368 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.19e-8■■■■■ 41.6
U2AF2P26368 UFD1-206ENST00000466373 3059 ntTSL 212.02□□□□□ -0.491e-14■■■■■ 41.4
U2AF2P26368 APOL2-203ENST00000451256 1421 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.087e-8■■■■■ 41.4
U2AF2P26368 APOL2-201ENST00000249066 2685 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.367e-8■■■■■ 41.4
U2AF2P26368 APOL2-202ENST00000358502 2551 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.637e-8■■■■■ 41.4
U2AF2P26368 APOL2-209ENST00000529194 611 ntTSL 311.08□□□□□ -0.647e-8■■■■■ 41.4
U2AF2P26368 APOL2-204ENST00000454728 577 ntTSL 49.88□□□□□ -0.837e-8■■■■■ 41.4
U2AF2P26368 SLMAP-203ENST00000383718 6749 ntTSL 2 BASIC10.02□□□□□ -0.812e-6■■■■■ 41.4
U2AF2P26368 DDX46-204ENST00000505592 555 ntTSL 24.45□□□□□ -1.73e-10■■■■■ 41.3
U2AF2P26368 INTS7-207ENST00000462910 674 ntTSL 20.11□□□□□ -2.399e-11■■■■■ 41.3
U2AF2P26368 PRPF8-207ENST00000573681 1044 ntTSL 214.9□□□□□ -0.023e-13■■■■■ 41.3
U2AF2P26368 ZMYM1-206ENST00000466390 508 ntTSL 312.97□□□□□ -0.339e-9■■■■■ 41.2
U2AF2P26368 ZMYM1-204ENST00000417119 1825 ntTSL 26.88□□□□□ -1.319e-9■■■■■ 41.2
U2AF2P26368 ZMYM1-208ENST00000476269 608 ntTSL 55.74□□□□□ -1.499e-9■■■■■ 41.2
U2AF2P26368 ZMYM1-209ENST00000488455 3055 ntTSL 25.61□□□□□ -1.519e-9■■■■■ 41.2
U2AF2P26368 ZMYM1-207ENST00000475654 665 ntTSL 53.61□□□□□ -1.839e-9■■■■■ 41.2
U2AF2P26368 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.919e-9■■■■■ 41.2
U2AF2P26368 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.929e-9■■■■■ 41.2
U2AF2P26368 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.929e-9■■■■■ 41.2
U2AF2P26368 ZMYM1-202ENST00000373329 3980 ntTSL 1 (best)2.84□□□□□ -1.969e-9■■■■■ 41.2
U2AF2P26368 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC27.61■■■□□ 2.011e-40■■■■■ 41.1
U2AF2P26368 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21.1■□□□□ 0.971e-40■■■■■ 41.1
U2AF2P26368 FBXO11-209ENST00000492225 2216 ntTSL 1 (best)14.29□□□□□ -0.128e-11■■■■■ 41
U2AF2P26368 FER-209ENST00000618353 1420 ntTSL 1 (best) BASIC8.98□□□□□ -0.978e-11■■■■■ 41
U2AF2P26368 TRIO-203ENST00000502490 798 ntTSL 37.65□□□□□ -1.188e-11■■■■■ 41
U2AF2P26368 C1orf112-205ENST00000466580 815 ntTSL 47.56□□□□□ -1.28e-11■■■■■ 41
U2AF2P26368 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.358e-11■■■■■ 41
U2AF2P26368 FER-205ENST00000505323 806 ntTSL 35.81□□□□□ -1.488e-11■■■■■ 41
U2AF2P26368 C1orf112-204ENST00000459772 3727 ntTSL 25.65□□□□□ -1.518e-11■■■■■ 41
U2AF2P26368 FER-204ENST00000504143 3132 ntTSL 55.35□□□□□ -1.558e-11■■■■■ 41
U2AF2P26368 C1orf112-209ENST00000498289 3849 ntTSL 25.27□□□□□ -1.578e-11■■■■■ 41
U2AF2P26368 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.618e-11■■■■■ 41
U2AF2P26368 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.668e-11■■■■■ 41
U2AF2P26368 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.738e-11■■■■■ 41
U2AF2P26368 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.88□□□□□ -1.798e-11■■■■■ 41
Retrieved 100 of 36,523 protein–RNA pairs in 107 ms