RNA–Protein interactions for RNA: ENST00000502490.1

TRIO-203, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-203ENST00000502490 AEBP2Q6ZN18 517 aaPredicted RBP20.78■□□□□ 0.92
TRIO-203ENST00000502490 CHIC1Q5VXU3 224 aa19.33■□□□□ 0.68
TRIO-203ENST00000502490 SENP3Q9H4L4 574 aaPredicted RBP17.81■□□□□ 0.44
TRIO-203ENST00000502490 PHF23Q9BUL5 403 aaPredicted RBP17.49■□□□□ 0.39
TRIO-203ENST00000502490 POTEDQ86YR6 584 aa17.32■□□□□ 0.36
TRIO-203ENST00000502490 FOXD1Q16676 465 aa16.77■□□□□ 0.28
TRIO-203ENST00000502490 MSH5O43196 834 aa16■□□□□ 0.15
TRIO-203ENST00000502490 PIAS4Q8N2W9 510 aaPredicted RBP15.42■□□□□ 0.06
TRIO-203ENST00000502490 PLPPR3Q6T4P5 718 aa15.05■□□□□ -0
TRIO-203ENST00000502490 PPP6R1Q9UPN7 881 aa14.98□□□□□ -0.01
TRIO-203ENST00000502490 ADRA2BP18089 450 aa14.86□□□□□ -0.03
TRIO-203ENST00000502490 CACNB1Q02641 598 aaPredicted RBP14.38□□□□□ -0.11
TRIO-203ENST00000502490 DMRT2Q9Y5R5 561 aa13.98□□□□□ -0.17
TRIO-203ENST00000502490 MAPK8IP2Q13387 824 aaPredicted RBP13.97□□□□□ -0.17
TRIO-203ENST00000502490 RNF39Q9H2S5 420 aa13.59□□□□□ -0.23
TRIO-203ENST00000502490 DCAF8L1A6NGE4 600 aa13.52□□□□□ -0.25
TRIO-203ENST00000502490 SCAF1Q9H7N4 1312 aaKnown RBP13.52□□□□□ -0.25
TRIO-203ENST00000502490 POTEHQ6S545 545 aa13.38□□□□□ -0.27
TRIO-203ENST00000502490 C1QBPQ07021 282 aaKnown RBP13.31□□□□□ -0.28
TRIO-203ENST00000502490 PPP4R3CPQ6ZMV5 832 aa13.25□□□□□ -0.29
TRIO-203ENST00000502490 HOXD11P31277 338 aaPredicted RBP13.08□□□□□ -0.32
TRIO-203ENST00000502490 CNKSR2Q8WXI2 1034 aa12.9□□□□□ -0.34
TRIO-203ENST00000502490 KCNA4P22459 653 aa12.87□□□□□ -0.35
TRIO-203ENST00000502490 NCBP3Q53F19 620 aaKnown RBP12.86□□□□□ -0.35
TRIO-203ENST00000502490 DNAJC5BQ9UF47 199 aa12.76□□□□□ -0.37
TRIO-203ENST00000502490 RNF216Q9NWF9 866 aaPredicted RBP12.72□□□□□ -0.37
TRIO-203ENST00000502490 NPM3O75607 178 aaKnown RBP12.71□□□□□ -0.37
TRIO-203ENST00000502490 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.5□□□□□ -0.41
TRIO-203ENST00000502490 DSG3P32926 999 aa12.42□□□□□ -0.42
TRIO-203ENST00000502490 NISCHQ9Y2I1 1504 aa12.27□□□□□ -0.44
TRIO-203ENST00000502490 CAPN15O75808 1086 aa12.27□□□□□ -0.45
TRIO-203ENST00000502490 SPINK5Q9NQ38 1064 aaPredicted RBP12.27□□□□□ -0.45
TRIO-203ENST00000502490 SLC4A1APQ9BWU0 796 aaKnown RBP12.23□□□□□ -0.45
TRIO-203ENST00000502490 U3KPZ7 1027 aaPredicted RBP12.12□□□□□ -0.47
TRIO-203ENST00000502490 SP7Q8TDD2 431 aaPredicted RBP12.08□□□□□ -0.48
TRIO-203ENST00000502490 SLC4A2P04920 1241 aa12.04□□□□□ -0.48
TRIO-203ENST00000502490 CHRDL2Q6WN34 429 aa11.99□□□□□ -0.49
TRIO-203ENST00000502490 ABCB7O75027 752 aa11.94□□□□□ -0.5
TRIO-203ENST00000502490 ZBTB22O15209 634 aa11.88□□□□□ -0.51
TRIO-203ENST00000502490 FOXD4L1Q9NU39 408 aa11.87□□□□□ -0.51
TRIO-203ENST00000502490 TRHP20396 242 aaPredicted RBP11.86□□□□□ -0.51
TRIO-203ENST00000502490 RBM42Q9BTD8 480 aaKnown RBP11.82□□□□□ -0.52
TRIO-203ENST00000502490 EHMT2Q96KQ7 1210 aa11.77□□□□□ -0.53
TRIO-203ENST00000502490 MYCNP04198 464 aaPredicted RBP11.74□□□□□ -0.53
TRIO-203ENST00000502490 CSRNP3Q8WYN3 585 aa11.74□□□□□ -0.53
TRIO-203ENST00000502490 ZNF219Q9P2Y4 722 aaPredicted RBP11.73□□□□□ -0.53
TRIO-203ENST00000502490 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.64□□□□□ -0.55
TRIO-203ENST00000502490 HNRNPUL2Q1KMD3 747 aaKnown RBP11.64□□□□□ -0.55
TRIO-203ENST00000502490 SAMD1Q6SPF0 538 aaPredicted RBP11.61□□□□□ -0.55
TRIO-203ENST00000502490 APLP2Q06481 763 aa11.6□□□□□ -0.55
TRIO-203ENST00000502490 HAX1O00165 279 aa11.58□□□□□ -0.56
TRIO-203ENST00000502490 PIP4P2Q8N4L2 257 aa11.52□□□□□ -0.57
TRIO-203ENST00000502490 ATXN8OSP0DMR3 200 aa11.49□□□□□ -0.57
TRIO-203ENST00000502490 PLSCR2Q9NRY7 297 aa11.46□□□□□ -0.57
TRIO-203ENST00000502490 ATF5Q9Y2D1 282 aaPredicted RBP11.44□□□□□ -0.58
TRIO-203ENST00000502490 EVX2Q03828 476 aa11.4□□□□□ -0.58
TRIO-203ENST00000502490 AKT1S1Q96B36 256 aa11.37□□□□□ -0.59
TRIO-203ENST00000502490 LHX8Q68G74 356 aa11.33□□□□□ -0.6
TRIO-203ENST00000502490 POLA2Q14181 598 aa11.31□□□□□ -0.6
TRIO-203ENST00000502490 REM2Q8IYK8 340 aaPredicted RBP11.3□□□□□ -0.6
TRIO-203ENST00000502490 FXR2P51116 673 aaKnown RBP eCLIP11.27□□□□□ -0.618e-7■■■■□ 19.7
TRIO-203ENST00000502490 PITPNM1O00562 1244 aa11.19□□□□□ -0.62
TRIO-203ENST00000502490 GABBR2O75899 941 aa11.05□□□□□ -0.64
TRIO-203ENST00000502490 ZBTB12Q9Y330 459 aaPredicted RBP11.01□□□□□ -0.65
TRIO-203ENST00000502490 OSCARQ8IYS5 282 aa10.98□□□□□ -0.65
TRIO-203ENST00000502490 MKRN4PQ13434 485 aaPredicted RBP10.96□□□□□ -0.65
TRIO-203ENST00000502490 C19orf67A6NJJ6 358 aa10.95□□□□□ -0.66
TRIO-203ENST00000502490 FBLN2P98095 1184 aa10.91□□□□□ -0.66
TRIO-203ENST00000502490 PRKAR2AP13861 404 aaKnown RBP10.89□□□□□ -0.67
TRIO-203ENST00000502490 POTEIP0CG38 1075 aa10.82□□□□□ -0.68
TRIO-203ENST00000502490 HRCP23327 699 aa10.75□□□□□ -0.69
TRIO-203ENST00000502490 SPDYE2BA6NHP3 402 aa10.72□□□□□ -0.69
TRIO-203ENST00000502490 POTEMA6NI47 508 aa10.72□□□□□ -0.69
TRIO-203ENST00000502490 SPDYE6P0CI01 402 aa10.72□□□□□ -0.69
TRIO-203ENST00000502490 SPDYE2Q495Y8 402 aa10.72□□□□□ -0.69
TRIO-203ENST00000502490 PELP1Q8IZL8 1130 aaKnown RBP10.71□□□□□ -0.69
TRIO-203ENST00000502490 CLEC11AQ9Y240 323 aa10.69□□□□□ -0.7
TRIO-203ENST00000502490 POTEGQ6S5H5 508 aa10.66□□□□□ -0.7
TRIO-203ENST00000502490 SSUH2Q9Y2M2 353 aa10.66□□□□□ -0.7
TRIO-203ENST00000502490 SPDYE4A6NLX3 237 aa10.63□□□□□ -0.71
TRIO-203ENST00000502490 ZNF692Q9BU19 519 aaPredicted RBP10.63□□□□□ -0.71
TRIO-203ENST00000502490 CCDC180Q9P1Z9 1646 aa10.6□□□□□ -0.71
TRIO-203ENST00000502490 CHADLQ6NUI6 762 aa10.6□□□□□ -0.71
TRIO-203ENST00000502490 SPDYE1Q8NFV5 336 aaPredicted RBP10.59□□□□□ -0.71
TRIO-203ENST00000502490 OTUD5Q96G74 571 aa10.59□□□□□ -0.71
TRIO-203ENST00000502490 FKBP8Q14318 412 aa10.57□□□□□ -0.72
TRIO-203ENST00000502490 PROM2Q8N271 834 aa10.54□□□□□ -0.72
TRIO-203ENST00000502490 DCBLD2Q96PD2 775 aa10.54□□□□□ -0.72
TRIO-203ENST00000502490 PCDH10Q9P2E7 1040 aa10.54□□□□□ -0.72
TRIO-203ENST00000502490 DCAF1Q9Y4B6 1507 aa10.52□□□□□ -0.73
TRIO-203ENST00000502490 PABPN1Q86U42 306 aaKnown RBP eCLIP10.5□□□□□ -0.73
TRIO-203ENST00000502490 CD44P16070 742 aaKnown RBP10.48□□□□□ -0.73
TRIO-203ENST00000502490 ZCCHC6Q5VYS8 1495 aaKnown RBP10.47□□□□□ -0.73
TRIO-203ENST00000502490 POTEB2H3BUK9 544 aa10.46□□□□□ -0.73
TRIO-203ENST00000502490 MYT1Q01538 1121 aa10.45□□□□□ -0.74
TRIO-203ENST00000502490 CLCN6P51797 869 aa10.44□□□□□ -0.74
TRIO-203ENST00000502490 ZEB1P37275 1124 aaPredicted RBP10.41□□□□□ -0.74
TRIO-203ENST00000502490 SUPT5HO00267 1087 aaKnown RBP10.36□□□□□ -0.75
TRIO-203ENST00000502490 PRR29P0C7W0 189 aa10.35□□□□□ -0.75
TRIO-203ENST00000502490 SHROOM4Q9ULL8 1493 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms