Protein–RNA interactions for Protein: P22459

KCNA4, Potassium voltage-gated channel subfamily A member 4, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA4P22459 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
KCNA4P22459 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
KCNA4P22459 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
KCNA4P22459 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
KCNA4P22459 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
KCNA4P22459 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC26.59■■□□□ 1.85
KCNA4P22459 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.59■■□□□ 1.85
KCNA4P22459 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
KCNA4P22459 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
KCNA4P22459 ST7-AS1-201ENST00000456775 1889 ntBASIC26.58■■□□□ 1.85
KCNA4P22459 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
KCNA4P22459 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.58■■□□□ 1.85
KCNA4P22459 CR559946.2-201ENST00000623684 991 ntBASIC26.58■■□□□ 1.85
KCNA4P22459 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
KCNA4P22459 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
KCNA4P22459 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
KCNA4P22459 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
KCNA4P22459 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
KCNA4P22459 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.56■■□□□ 1.84
KCNA4P22459 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.56■■□□□ 1.84
KCNA4P22459 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
KCNA4P22459 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
KCNA4P22459 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.56■■□□□ 1.84
KCNA4P22459 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
KCNA4P22459 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.55■■□□□ 1.84
KCNA4P22459 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
KCNA4P22459 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
KCNA4P22459 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
KCNA4P22459 DUX4L11-201ENST00000611504 1267 ntBASIC26.55■■□□□ 1.84
KCNA4P22459 DUX4L12-201ENST00000614593 1267 ntBASIC26.55■■□□□ 1.84
KCNA4P22459 DUX4L14-201ENST00000621227 1267 ntBASIC26.55■■□□□ 1.84
KCNA4P22459 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
KCNA4P22459 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
KCNA4P22459 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.53■■□□□ 1.84
KCNA4P22459 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
KCNA4P22459 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
KCNA4P22459 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
KCNA4P22459 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
KCNA4P22459 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.52■■□□□ 1.84
KCNA4P22459 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.51■■□□□ 1.83
KCNA4P22459 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.51■■□□□ 1.83
KCNA4P22459 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
KCNA4P22459 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
KCNA4P22459 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.51■■□□□ 1.83
KCNA4P22459 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
KCNA4P22459 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
KCNA4P22459 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
KCNA4P22459 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC26.5■■□□□ 1.83
KCNA4P22459 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
KCNA4P22459 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.5■■□□□ 1.83
KCNA4P22459 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
KCNA4P22459 OR13I1P-201ENST00000609811 1264 ntBASIC26.49■■□□□ 1.83
KCNA4P22459 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
KCNA4P22459 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.48■■□□□ 1.83
KCNA4P22459 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
KCNA4P22459 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
KCNA4P22459 NAA50-208ENST00000497255 789 ntTSL 5 BASIC26.47■■□□□ 1.83
KCNA4P22459 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
KCNA4P22459 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
KCNA4P22459 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
KCNA4P22459 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
KCNA4P22459 AL390728.6-201ENST00000566446 1246 ntBASIC26.46■■□□□ 1.83
KCNA4P22459 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.46■■□□□ 1.83
KCNA4P22459 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
KCNA4P22459 WASH5P-204ENST00000632292 975 ntBASIC26.46■■□□□ 1.83
KCNA4P22459 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
KCNA4P22459 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
KCNA4P22459 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC26.45■■□□□ 1.82
KCNA4P22459 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.82
KCNA4P22459 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.45■■□□□ 1.82
KCNA4P22459 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
KCNA4P22459 LINC01971-201ENST00000617888 1048 ntBASIC26.44■■□□□ 1.82
KCNA4P22459 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
KCNA4P22459 HMGB3P14-201ENST00000494195 599 ntBASIC26.43■■□□□ 1.82
KCNA4P22459 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
KCNA4P22459 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
KCNA4P22459 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
KCNA4P22459 COA4-204ENST00000541455 1038 ntTSL 5 BASIC26.41■■□□□ 1.82
KCNA4P22459 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
KCNA4P22459 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
KCNA4P22459 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
KCNA4P22459 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
KCNA4P22459 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
KCNA4P22459 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.4■■□□□ 1.82
KCNA4P22459 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.4■■□□□ 1.82
KCNA4P22459 MIR3908-201ENST00000579798 126 ntBASIC26.4■■□□□ 1.82
KCNA4P22459 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
KCNA4P22459 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.39■■□□□ 1.82
KCNA4P22459 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
KCNA4P22459 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
KCNA4P22459 ACTG1P22-201ENST00000603793 1099 ntBASIC26.39■■□□□ 1.82
KCNA4P22459 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
KCNA4P22459 AC108673.1-201ENST00000510422 1159 ntBASIC26.38■■□□□ 1.81
KCNA4P22459 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.38■■□□□ 1.81
KCNA4P22459 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
KCNA4P22459 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
KCNA4P22459 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC26.37■■□□□ 1.81
KCNA4P22459 MIR6090-201ENST00000622481 60 ntBASIC26.37■■□□□ 1.81
KCNA4P22459 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
KCNA4P22459 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms