Protein–RNA interactions for Protein: P0C2J4

TY2A-LR1, Transposon Ty2-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-LR1P0C2J4 RCR1YBR005W 642 nt7.63□□□□□ -1.19
TY2A-LR1P0C2J4 COG1YGL223C 1254 nt7.62□□□□□ -1.19
TY2A-LR1P0C2J4 YOR072WYOR072W 315 nt7.62□□□□□ -1.19
TY2A-LR1P0C2J4 MEP1YGR121C 1479 nt7.62□□□□□ -1.19
TY2A-LR1P0C2J4 CSM2YIL132C 642 nt7.61□□□□□ -1.19
TY2A-LR1P0C2J4 HXT11YOL156W 1704 nt7.61□□□□□ -1.19
TY2A-LR1P0C2J4 YIA6YIL006W 1122 nt7.6□□□□□ -1.19
TY2A-LR1P0C2J4 RNA170RNA170 169 nt7.6□□□□□ -1.19
TY2A-LR1P0C2J4 PDC6YGR087C 1692 nt7.6□□□□□ -1.19
TY2A-LR1P0C2J4 RRT14YIL127C 621 nt7.58□□□□□ -1.2
TY2A-LR1P0C2J4 RHO1YPR165W 630 nt7.58□□□□□ -1.2
TY2A-LR1P0C2J4 tD(GUC)BtD(GUC)B 72 nt7.57□□□□□ -1.2
TY2A-LR1P0C2J4 tD(GUC)DtD(GUC)D 72 nt7.57□□□□□ -1.2
TY2A-LR1P0C2J4 tD(GUC)G1tD(GUC)G1 72 nt7.57□□□□□ -1.2
TY2A-LR1P0C2J4 tD(GUC)G2tD(GUC)G2 72 nt7.57□□□□□ -1.2
TY2A-LR1P0C2J4 tD(GUC)I1tD(GUC)I1 72 nt7.57□□□□□ -1.2
TY2A-LR1P0C2J4 tD(GUC)I2tD(GUC)I2 72 nt7.57□□□□□ -1.2
TY2A-LR1P0C2J4 tD(GUC)J1tD(GUC)J1 72 nt7.57□□□□□ -1.2
TY2A-LR1P0C2J4 tD(GUC)J2tD(GUC)J2 72 nt7.57□□□□□ -1.2
TY2A-LR1P0C2J4 tD(GUC)J3tD(GUC)J3 72 nt7.57□□□□□ -1.2
TY2A-LR1P0C2J4 tD(GUC)J4tD(GUC)J4 72 nt7.57□□□□□ -1.2
TY2A-LR1P0C2J4 tD(GUC)KtD(GUC)K 72 nt7.57□□□□□ -1.2
TY2A-LR1P0C2J4 tD(GUC)L1tD(GUC)L1 72 nt7.57□□□□□ -1.2
TY2A-LR1P0C2J4 tD(GUC)L2tD(GUC)L2 72 nt7.57□□□□□ -1.2
TY2A-LR1P0C2J4 tD(GUC)MtD(GUC)M 72 nt7.57□□□□□ -1.2
TY2A-LR1P0C2J4 tD(GUC)OtD(GUC)O 72 nt7.57□□□□□ -1.2
TY2A-LR1P0C2J4 SOD2YHR008C 702 nt7.56□□□□□ -1.2
TY2A-LR1P0C2J4 YJL160CYJL160C 864 nt7.56□□□□□ -1.2
TY2A-LR1P0C2J4 RIB1YBL033C 1038 nt7.56□□□□□ -1.2
TY2A-LR1P0C2J4 SRM1YGL097W 1449 nt7.55□□□□□ -1.2
TY2A-LR1P0C2J4 PET18YCR020C 648 nt7.55□□□□□ -1.2
TY2A-LR1P0C2J4 YPT31YER031C 672 nt7.55□□□□□ -1.2
TY2A-LR1P0C2J4 MGM101YJR144W 810 nt7.55□□□□□ -1.2
TY2A-LR1P0C2J4 YMR210WYMR210W 1350 nt7.55□□□□□ -1.2
TY2A-LR1P0C2J4 YLR072WYLR072W 2082 nt7.55□□□□□ -1.2
TY2A-LR1P0C2J4 THI73YLR004C 1572 nt7.54□□□□□ -1.2
TY2A-LR1P0C2J4 HIS3YOR202W 663 nt7.54□□□□□ -1.2
TY2A-LR1P0C2J4 LEA1YPL213W 717 nt7.54□□□□□ -1.2
TY2A-LR1P0C2J4 FAF1YIL019W 1041 nt7.53□□□□□ -1.2
TY2A-LR1P0C2J4 INO1YJL153C 1602 nt7.52□□□□□ -1.2
TY2A-LR1P0C2J4 PUP3YER094C 618 nt7.52□□□□□ -1.21
TY2A-LR1P0C2J4 MIM1YOL026C 342 nt7.52□□□□□ -1.21
TY2A-LR1P0C2J4 YRF1-3YGR296W 5580 nt7.51□□□□□ -1.21
TY2A-LR1P0C2J4 YRF1-6YNL339C 5580 nt7.51□□□□□ -1.21
TY2A-LR1P0C2J4 YRF1-7YPL283C 5580 nt7.51□□□□□ -1.21
TY2A-LR1P0C2J4 YPR084WYPR084W 1371 nt7.51□□□□□ -1.21
TY2A-LR1P0C2J4 BUD31YCR063W 474 nt7.51□□□□□ -1.21
TY2A-LR1P0C2J4 YMR206WYMR206W 942 nt7.51□□□□□ -1.21
TY2A-LR1P0C2J4 NDE2YDL085W 1638 nt7.51□□□□□ -1.21
TY2A-LR1P0C2J4 YHR131CYHR131C 2553 nt7.5□□□□□ -1.21
TY2A-LR1P0C2J4 RCF1YML030W 480 nt7.5□□□□□ -1.21
TY2A-LR1P0C2J4 RPS6AYPL090C 711 nt7.5□□□□□ -1.21
TY2A-LR1P0C2J4 RPS6BYBR181C 711 nt7.5□□□□□ -1.21
TY2A-LR1P0C2J4 SHC1YER096W 1539 nt7.5□□□□□ -1.21
TY2A-LR1P0C2J4 LRO1YNR008W 1986 nt7.5□□□□□ -1.21
TY2A-LR1P0C2J4 EHT1YBR177C 1356 nt7.49□□□□□ -1.21
TY2A-LR1P0C2J4 ABP1YCR088W 1779 nt7.49□□□□□ -1.21
TY2A-LR1P0C2J4 MFT1YML062C 1179 nt7.49□□□□□ -1.21
TY2A-LR1P0C2J4 BXI1YNL305C 894 nt7.49□□□□□ -1.21
TY2A-LR1P0C2J4 ORT1YOR130C 879 nt7.49□□□□□ -1.21
TY2A-LR1P0C2J4 YIL177CYIL177C 5277 nt7.49□□□□□ -1.21
TY2A-LR1P0C2J4 MEX67YPL169C 1800 nt7.48□□□□□ -1.21
TY2A-LR1P0C2J4 YER156CYER156C 1017 nt7.48□□□□□ -1.21
TY2A-LR1P0C2J4 YHL030W-AYHL030W-A 462 nt7.48□□□□□ -1.21
TY2A-LR1P0C2J4 ERG6YML008C 1152 nt7.48□□□□□ -1.21
TY2A-LR1P0C2J4 HBS1YKR084C 1836 nt7.46□□□□□ -1.21
TY2A-LR1P0C2J4 YGR137WYGR137W 375 nt7.46□□□□□ -1.22
TY2A-LR1P0C2J4 FTH1YBR207W 1398 nt7.46□□□□□ -1.22
TY2A-LR1P0C2J4 UTR5YEL035C 501 nt7.45□□□□□ -1.22
TY2A-LR1P0C2J4 TDA4YJR116W 840 nt7.45□□□□□ -1.22
TY2A-LR1P0C2J4 YTH1YPR107C 627 nt7.45□□□□□ -1.22
TY2A-LR1P0C2J4 DIP5YPL265W 1827 nt7.44□□□□□ -1.22
TY2A-LR1P0C2J4 YNL140CYNL140C 570 nt7.44□□□□□ -1.22
TY2A-LR1P0C2J4 PRE10YOR362C 867 nt7.44□□□□□ -1.22
TY2A-LR1P0C2J4 TGL5YOR081C 2250 nt7.44□□□□□ -1.22
TY2A-LR1P0C2J4 INM1YHR046C 888 nt7.43□□□□□ -1.22
TY2A-LR1P0C2J4 WSC3YOL105C 1671 nt7.43□□□□□ -1.22
TY2A-LR1P0C2J4 TIF3YPR163C 1311 nt7.43□□□□□ -1.22
TY2A-LR1P0C2J4 HXT8YJL214W 1710 nt7.43□□□□□ -1.22
TY2A-LR1P0C2J4 GAL2YLR081W 1725 nt7.43□□□□□ -1.22
TY2A-LR1P0C2J4 ATG22YCL038C 1587 nt7.42□□□□□ -1.22
TY2A-LR1P0C2J4 GLY1YEL046C 1164 nt7.42□□□□□ -1.22
TY2A-LR1P0C2J4 MDL2YPL270W 2322 nt7.42□□□□□ -1.22
TY2A-LR1P0C2J4 GRH1YDR517W 1119 nt7.41□□□□□ -1.22
TY2A-LR1P0C2J4 PMU1YKL128C 888 nt7.41□□□□□ -1.22
TY2A-LR1P0C2J4 snR4snR4 186 nt7.41□□□□□ -1.22
TY2A-LR1P0C2J4 FRA1YLL029W 2250 nt7.4□□□□□ -1.22
TY2A-LR1P0C2J4 MRP7YNL005C 1116 nt7.4□□□□□ -1.22
TY2A-LR1P0C2J4 IDP3YNL009W 1263 nt7.4□□□□□ -1.22
TY2A-LR1P0C2J4 ADA2YDR448W 1305 nt7.4□□□□□ -1.22
TY2A-LR1P0C2J4 POP2YNR052C 1302 nt7.4□□□□□ -1.22
TY2A-LR1P0C2J4 TIM50YPL063W 1431 nt7.4□□□□□ -1.22
TY2A-LR1P0C2J4 TOK1YJL093C 2076 nt7.39□□□□□ -1.23
TY2A-LR1P0C2J4 JHD1YER051W 1479 nt7.39□□□□□ -1.23
TY2A-LR1P0C2J4 ALG7YBR243C 1347 nt7.39□□□□□ -1.23
TY2A-LR1P0C2J4 GTB1YDR221W 2109 nt7.39□□□□□ -1.23
TY2A-LR1P0C2J4 ATP2YJR121W 1536 nt7.38□□□□□ -1.23
TY2A-LR1P0C2J4 HDA1YNL021W 2121 nt7.38□□□□□ -1.23
TY2A-LR1P0C2J4 MRN1YPL184C 1839 nt7.38□□□□□ -1.23
TY2A-LR1P0C2J4 ARO3YDR035W 1113 nt7.37□□□□□ -1.23
Retrieved 100 of 7,029 protein–RNA pairs in 28.3 ms