Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NPC1L1Q9UHC9 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
NPC1L1Q9UHC9 THAP12P5-201ENST00000405864 2275 ntBASIC6.39□□□□□ -1.39
NPC1L1Q9UHC9 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
NPC1L1Q9UHC9 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NPC1L1Q9UHC9 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NPC1L1Q9UHC9 AC000374.1-201ENST00000434698 1745 ntBASIC6.38□□□□□ -1.39
NPC1L1Q9UHC9 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6.38□□□□□ -1.39
NPC1L1Q9UHC9 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NPC1L1Q9UHC9 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NPC1L1Q9UHC9 RNA5SP505-201ENST00000364748 108 ntBASIC6.38□□□□□ -1.39
NPC1L1Q9UHC9 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NPC1L1Q9UHC9 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC6.38□□□□□ -1.39
NPC1L1Q9UHC9 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.38□□□□□ -1.39
NPC1L1Q9UHC9 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC6.38□□□□□ -1.39
NPC1L1Q9UHC9 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC6.38□□□□□ -1.39
NPC1L1Q9UHC9 NDUFA12P1-201ENST00000455914 406 ntBASIC6.38□□□□□ -1.39
NPC1L1Q9UHC9 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.38□□□□□ -1.39
NPC1L1Q9UHC9 AC090142.1-201ENST00000465776 462 ntBASIC6.38□□□□□ -1.39
NPC1L1Q9UHC9 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC6.38□□□□□ -1.39
NPC1L1Q9UHC9 FTH1P11-201ENST00000517577 551 ntBASIC6.38□□□□□ -1.39
NPC1L1Q9UHC9 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC6.38□□□□□ -1.39
NPC1L1Q9UHC9 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC6.38□□□□□ -1.39
NPC1L1Q9UHC9 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.38□□□□□ -1.39
NPC1L1Q9UHC9 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.38□□□□□ -1.39
NPC1L1Q9UHC9 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC6.38□□□□□ -1.39
NPC1L1Q9UHC9 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.38□□□□□ -1.39
NPC1L1Q9UHC9 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC6.38□□□□□ -1.39
NPC1L1Q9UHC9 STX3-208ENST00000641815 3236 ntBASIC6.38□□□□□ -1.39
NPC1L1Q9UHC9 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NPC1L1Q9UHC9 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NPC1L1Q9UHC9 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC6.38□□□□□ -1.39
NPC1L1Q9UHC9 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
NPC1L1Q9UHC9 AL445487.1-201ENST00000415694 1580 ntBASIC6.37□□□□□ -1.39
NPC1L1Q9UHC9 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
NPC1L1Q9UHC9 AL356317.1-201ENST00000396110 1436 ntBASIC6.37□□□□□ -1.39
NPC1L1Q9UHC9 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
NPC1L1Q9UHC9 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NPC1L1Q9UHC9 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NPC1L1Q9UHC9 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC6.37□□□□□ -1.39
NPC1L1Q9UHC9 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
NPC1L1Q9UHC9 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
NPC1L1Q9UHC9 TDGF1P1-201ENST00000445734 527 ntBASIC6.37□□□□□ -1.39
NPC1L1Q9UHC9 AC010326.1-201ENST00000462726 602 ntBASIC6.37□□□□□ -1.39
NPC1L1Q9UHC9 RN7SL385P-201ENST00000468873 276 ntBASIC6.37□□□□□ -1.39
NPC1L1Q9UHC9 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NPC1L1Q9UHC9 AC007016.1-201ENST00000512110 244 ntBASIC6.37□□□□□ -1.39
NPC1L1Q9UHC9 AC093524.1-201ENST00000564266 1094 ntBASIC6.37□□□□□ -1.39
NPC1L1Q9UHC9 AC105036.1-201ENST00000566222 271 ntBASIC6.37□□□□□ -1.39
NPC1L1Q9UHC9 RN7SL435P-201ENST00000584418 282 ntBASIC6.37□□□□□ -1.39
NPC1L1Q9UHC9 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC6.37□□□□□ -1.39
NPC1L1Q9UHC9 AC015804.1-201ENST00000622935 435 ntBASIC6.37□□□□□ -1.39
NPC1L1Q9UHC9 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.37□□□□□ -1.39
NPC1L1Q9UHC9 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
NPC1L1Q9UHC9 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NPC1L1Q9UHC9 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NPC1L1Q9UHC9 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC6.37□□□□□ -1.39
NPC1L1Q9UHC9 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
NPC1L1Q9UHC9 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
NPC1L1Q9UHC9 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
NPC1L1Q9UHC9 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
NPC1L1Q9UHC9 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC6.36□□□□□ -1.39
NPC1L1Q9UHC9 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC6.36□□□□□ -1.39
NPC1L1Q9UHC9 DHX40P1-201ENST00000588725 1412 ntBASIC6.36□□□□□ -1.39
NPC1L1Q9UHC9 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NPC1L1Q9UHC9 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC6.36□□□□□ -1.39
NPC1L1Q9UHC9 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NPC1L1Q9UHC9 AC092570.3-201ENST00000420113 693 ntBASIC6.36□□□□□ -1.39
NPC1L1Q9UHC9 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC6.36□□□□□ -1.39
NPC1L1Q9UHC9 AC004938.1-201ENST00000438468 308 ntBASIC6.36□□□□□ -1.39
NPC1L1Q9UHC9 AL445433.1-201ENST00000457507 257 ntBASIC6.36□□□□□ -1.39
NPC1L1Q9UHC9 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
NPC1L1Q9UHC9 MTND4LP2-201ENST00000502312 285 ntBASIC6.36□□□□□ -1.39
NPC1L1Q9UHC9 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC6.36□□□□□ -1.39
NPC1L1Q9UHC9 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC6.36□□□□□ -1.39
NPC1L1Q9UHC9 AC068993.1-201ENST00000546724 589 ntBASIC6.36□□□□□ -1.39
NPC1L1Q9UHC9 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.36□□□□□ -1.39
NPC1L1Q9UHC9 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC6.36□□□□□ -1.39
NPC1L1Q9UHC9 RN7SL652P-201ENST00000577769 300 ntBASIC6.36□□□□□ -1.39
NPC1L1Q9UHC9 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC6.36□□□□□ -1.39
NPC1L1Q9UHC9 AL139041.1-201ENST00000605480 610 ntBASIC6.36□□□□□ -1.39
NPC1L1Q9UHC9 AC073137.1-201ENST00000605636 634 ntBASIC6.36□□□□□ -1.39
NPC1L1Q9UHC9 AC004232.3-201ENST00000622977 525 ntBASIC6.36□□□□□ -1.39
NPC1L1Q9UHC9 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC6.36□□□□□ -1.39
NPC1L1Q9UHC9 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC6.36□□□□□ -1.39
NPC1L1Q9UHC9 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC6.36□□□□□ -1.39
NPC1L1Q9UHC9 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NPC1L1Q9UHC9 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC6.36□□□□□ -1.39
NPC1L1Q9UHC9 RBPJP2-201ENST00000618187 1444 ntBASIC6.36□□□□□ -1.39
NPC1L1Q9UHC9 API5-210ENST00000534600 1760 ntTSL 5 BASIC6.35□□□□□ -1.39
NPC1L1Q9UHC9 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
NPC1L1Q9UHC9 AC022893.2-201ENST00000564832 3296 ntBASIC6.35□□□□□ -1.39
NPC1L1Q9UHC9 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NPC1L1Q9UHC9 SNORA62-201ENST00000365493 153 ntBASIC6.35□□□□□ -1.39
NPC1L1Q9UHC9 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NPC1L1Q9UHC9 TPT1P12-201ENST00000448968 492 ntBASIC6.35□□□□□ -1.39
NPC1L1Q9UHC9 SCARNA10-201ENST00000459255 330 ntBASIC6.35□□□□□ -1.39
NPC1L1Q9UHC9 RPL12P20-201ENST00000475538 479 ntBASIC6.35□□□□□ -1.39
NPC1L1Q9UHC9 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC6.35□□□□□ -1.39
NPC1L1Q9UHC9 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms