Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.74□□□□□ -1.65
CHD7Q9P2D1 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC4.74□□□□□ -1.65
CHD7Q9P2D1 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CHD7Q9P2D1 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHD7Q9P2D1 PCDH15-210ENST00000395438 5806 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CHD7Q9P2D1 AC114814.2-201ENST00000419195 485 ntBASIC4.74□□□□□ -1.65
CHD7Q9P2D1 MFSD13B-201ENST00000420133 1290 ntBASIC4.74□□□□□ -1.65
CHD7Q9P2D1 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CHD7Q9P2D1 BX276092.6-201ENST00000430476 250 ntBASIC4.74□□□□□ -1.65
CHD7Q9P2D1 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.74□□□□□ -1.65
CHD7Q9P2D1 BX276092.8-201ENST00000455722 250 ntBASIC4.74□□□□□ -1.65
CHD7Q9P2D1 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CHD7Q9P2D1 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.74□□□□□ -1.65
CHD7Q9P2D1 AC112230.1-201ENST00000604342 547 ntBASIC4.74□□□□□ -1.65
CHD7Q9P2D1 AC005899.7-201ENST00000618199 588 ntBASIC4.74□□□□□ -1.65
CHD7Q9P2D1 AL033543.1-201ENST00000623440 13454 ntBASIC4.74□□□□□ -1.65
CHD7Q9P2D1 AL031119.1-201ENST00000404707 1879 ntBASIC4.74□□□□□ -1.65
CHD7Q9P2D1 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CHD7Q9P2D1 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC4.74□□□□□ -1.65
CHD7Q9P2D1 MT-RNR1-201ENST00000389680 954 ntBASIC4.74□□□□□ -1.65
CHD7Q9P2D1 RPL21P65-201ENST00000406094 466 ntBASIC4.74□□□□□ -1.65
CHD7Q9P2D1 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.74□□□□□ -1.65
CHD7Q9P2D1 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.74□□□□□ -1.65
CHD7Q9P2D1 AC146944.2-203ENST00000502493 354 ntBASIC4.74□□□□□ -1.65
CHD7Q9P2D1 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CHD7Q9P2D1 AC139495.1-202ENST00000513164 354 ntBASIC4.74□□□□□ -1.65
CHD7Q9P2D1 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.74□□□□□ -1.65
CHD7Q9P2D1 AC025857.2-201ENST00000602711 238 ntBASIC4.74□□□□□ -1.65
CHD7Q9P2D1 AC243756.2-201ENST00000618406 463 ntBASIC4.74□□□□□ -1.65
CHD7Q9P2D1 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CHD7Q9P2D1 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CHD7Q9P2D1 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHD7Q9P2D1 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CHD7Q9P2D1 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CHD7Q9P2D1 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CHD7Q9P2D1 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CHD7Q9P2D1 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CHD7Q9P2D1 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.73□□□□□ -1.65
CHD7Q9P2D1 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.73□□□□□ -1.65
CHD7Q9P2D1 SNORA70.9-201ENST00000384370 135 ntBASIC4.73□□□□□ -1.65
CHD7Q9P2D1 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.73□□□□□ -1.65
CHD7Q9P2D1 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.73□□□□□ -1.65
CHD7Q9P2D1 AC016559.2-201ENST00000510759 359 ntBASIC4.73□□□□□ -1.65
CHD7Q9P2D1 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.73□□□□□ -1.65
CHD7Q9P2D1 AC090181.2-201ENST00000602975 672 ntBASIC4.73□□□□□ -1.65
CHD7Q9P2D1 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.73□□□□□ -1.65
CHD7Q9P2D1 AC007786.3-201ENST00000615154 596 ntBASIC4.73□□□□□ -1.65
CHD7Q9P2D1 MIR7151-201ENST00000617477 60 ntBASIC4.73□□□□□ -1.65
CHD7Q9P2D1 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
CHD7Q9P2D1 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
CHD7Q9P2D1 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.73□□□□□ -1.65
CHD7Q9P2D1 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CHD7Q9P2D1 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CHD7Q9P2D1 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CHD7Q9P2D1 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.73□□□□□ -1.65
CHD7Q9P2D1 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC4.73□□□□□ -1.65
CHD7Q9P2D1 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CHD7Q9P2D1 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CHD7Q9P2D1 RNU6ATAC-201ENST00000408749 126 ntBASIC4.73□□□□□ -1.65
CHD7Q9P2D1 RGS17P1-201ENST00000423358 553 ntBASIC4.73□□□□□ -1.65
CHD7Q9P2D1 AL136231.1-201ENST00000429407 730 ntBASIC4.73□□□□□ -1.65
CHD7Q9P2D1 AC138761.5-201ENST00000433967 325 ntBASIC4.73□□□□□ -1.65
CHD7Q9P2D1 ISCUP1-201ENST00000454451 448 ntBASIC4.73□□□□□ -1.65
CHD7Q9P2D1 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.73□□□□□ -1.65
CHD7Q9P2D1 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.73□□□□□ -1.65
CHD7Q9P2D1 TMEM30CP-203ENST00000637814 1035 ntBASIC4.73□□□□□ -1.65
CHD7Q9P2D1 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.73□□□□□ -1.65
CHD7Q9P2D1 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC4.73□□□□□ -1.65
CHD7Q9P2D1 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
CHD7Q9P2D1 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CHD7Q9P2D1 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.73□□□□□ -1.65
CHD7Q9P2D1 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CHD7Q9P2D1 LINC00622-201ENST00000562811 1570 ntBASIC4.73□□□□□ -1.65
CHD7Q9P2D1 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC4.73□□□□□ -1.65
CHD7Q9P2D1 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHD7Q9P2D1 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CHD7Q9P2D1 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.72□□□□□ -1.65
CHD7Q9P2D1 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.72□□□□□ -1.65
CHD7Q9P2D1 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.72□□□□□ -1.65
CHD7Q9P2D1 FAM27D1-201ENST00000612308 341 ntBASIC4.72□□□□□ -1.65
CHD7Q9P2D1 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHD7Q9P2D1 AC092162.3-201ENST00000624511 1624 ntBASIC4.72□□□□□ -1.65
CHD7Q9P2D1 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.72□□□□□ -1.65
CHD7Q9P2D1 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHD7Q9P2D1 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CHD7Q9P2D1 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CHD7Q9P2D1 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHD7Q9P2D1 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.72□□□□□ -1.65
CHD7Q9P2D1 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.72□□□□□ -1.65
CHD7Q9P2D1 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.72□□□□□ -1.65
CHD7Q9P2D1 AL050321.1-201ENST00000432363 400 ntBASIC4.72□□□□□ -1.65
CHD7Q9P2D1 MTND2P40-201ENST00000436718 841 ntBASIC4.72□□□□□ -1.65
CHD7Q9P2D1 AC104651.2-201ENST00000447549 528 ntBASIC4.72□□□□□ -1.65
CHD7Q9P2D1 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.72□□□□□ -1.65
CHD7Q9P2D1 RN7SKP67-201ENST00000515905 235 ntBASIC4.72□□□□□ -1.65
CHD7Q9P2D1 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.72□□□□□ -1.65
CHD7Q9P2D1 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.72□□□□□ -1.65
CHD7Q9P2D1 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.72□□□□□ -1.65
CHD7Q9P2D1 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.72□□□□□ -1.65
CHD7Q9P2D1 AC107982.3-201ENST00000584957 985 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms