Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 AC008429.2-201ENST00000523057 864 ntBASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 AC087257.2-201ENST00000538759 928 ntBASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 RPL3P13-201ENST00000550415 216 ntBASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 MIR4675-201ENST00000577898 77 ntBASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 H3F3BP2-201ENST00000583907 357 ntBASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 NRBF2P1-201ENST00000587407 859 ntBASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 OR7E19P-202ENST00000589942 844 ntBASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 XIAPP1-201ENST00000603162 600 ntBASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 MIR6889-201ENST00000613185 59 ntBASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 AL442128.2-201ENST00000620246 1824 ntBASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 AC104162.1-201ENST00000430831 2382 ntBASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 CTAGE11P-201ENST00000451540 2353 ntBASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
CUEDC1Q9NWM3 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 CYP4Z2P-201ENST00000423332 1512 ntBASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 MAPK10-270ENST00000641102 3538 ntBASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 AL356361.1-201ENST00000400943 1459 ntBASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 TMSB4XP2-201ENST00000335179 210 ntBASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 RNU6-1322P-201ENST00000364309 107 ntBASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 RNU6-723P-201ENST00000383973 107 ntBASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 RNU6-225P-201ENST00000384613 103 ntBASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 EI24P3-201ENST00000399046 1062 ntBASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 CNN3P1-201ENST00000401596 935 ntBASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 RNU2-47P-201ENST00000410649 186 ntBASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 RPL35AP12-201ENST00000425362 338 ntBASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 SNRPEP4-201ENST00000435815 279 ntBASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 MTND6P13-201ENST00000443510 523 ntBASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 CBWD4P-201ENST00000445695 655 ntBASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 CECR9-201ENST00000453421 199 ntBASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 SNORD19B-201ENST00000459623 84 ntBASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 RN7SL251P-201ENST00000464175 297 ntBASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 RN7SL741P-201ENST00000482473 289 ntBASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 AL163540.1-201ENST00000485382 386 ntBASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 AC103851.1-201ENST00000506833 274 ntBASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 RAD21-204ENST00000518055 896 ntTSL 2 BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 IGJP1-201ENST00000522682 475 ntBASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 AC018442.3-201ENST00000523025 183 ntBASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 UBE2CP4-201ENST00000561405 535 ntBASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 AL669831.4-202ENST00000590817 238 ntBASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 AC087588.2-201ENST00000617667 426 ntBASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 C2orf27A-204ENST00000623058 969 ntBASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 FKBP1AP4-201ENST00000631775 336 ntBASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms