Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AC122685.1-202ENST00000556750 555 ntTSL 2 BASIC6.96□□□□□ -1.3
CNTNAP3Q9BZ76 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC6.96□□□□□ -1.3
CNTNAP3Q9BZ76 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC6.96□□□□□ -1.3
CNTNAP3Q9BZ76 FRG2DP-202ENST00000566967 323 ntBASIC6.96□□□□□ -1.3
CNTNAP3Q9BZ76 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.96□□□□□ -1.3
CNTNAP3Q9BZ76 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.96□□□□□ -1.3
CNTNAP3Q9BZ76 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC6.96□□□□□ -1.3
CNTNAP3Q9BZ76 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC6.96□□□□□ -1.3
CNTNAP3Q9BZ76 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CNTNAP3Q9BZ76 AC008626.2-201ENST00000624425 248 ntBASIC6.96□□□□□ -1.3
CNTNAP3Q9BZ76 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC6.96□□□□□ -1.3
CNTNAP3Q9BZ76 AC093591.3-201ENST00000634516 308 ntBASIC6.96□□□□□ -1.3
CNTNAP3Q9BZ76 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
CNTNAP3Q9BZ76 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CNTNAP3Q9BZ76 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
CNTNAP3Q9BZ76 GNG12-201ENST00000370982 4404 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CNTNAP3Q9BZ76 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC6.96□□□□□ -1.3
CNTNAP3Q9BZ76 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6.96□□□□□ -1.3
CNTNAP3Q9BZ76 AC145138.1-201ENST00000512908 2851 ntBASIC6.96□□□□□ -1.3
CNTNAP3Q9BZ76 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
CNTNAP3Q9BZ76 CKAP2P1-201ENST00000555477 2049 ntBASIC6.96□□□□□ -1.3
CNTNAP3Q9BZ76 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
CNTNAP3Q9BZ76 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.3
CNTNAP3Q9BZ76 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
CNTNAP3Q9BZ76 LINC00598-208ENST00000617777 2551 ntTSL 2 BASIC6.96□□□□□ -1.3
CNTNAP3Q9BZ76 AL353052.2-201ENST00000441459 2241 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CNTNAP3Q9BZ76 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CNTNAP3Q9BZ76 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CNTNAP3Q9BZ76 ZNF734P-201ENST00000419494 1534 ntBASIC6.96□□□□□ -1.3
CNTNAP3Q9BZ76 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 TMEM182-203ENST00000412401 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 CREM-208ENST00000361599 2170 ntTSL 5 BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 GRAMD2B-212ENST00000513040 2196 ntTSL 2 BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 RNA5SP308-201ENST00000362532 115 ntBASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 RNA5SP382-201ENST00000363355 112 ntBASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 RNU6-452P-201ENST00000384406 107 ntBASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 RNU6-308P-201ENST00000390957 107 ntBASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 FCAR-205ENST00000391723 754 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 RPL32P23-201ENST00000397237 405 ntBASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 SNORA77.2-201ENST00000408571 112 ntBASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 PIGX-204ENST00000421265 677 ntTSL 2 BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 AL513175.1-201ENST00000431492 780 ntBASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 SEPT7P5-201ENST00000434048 306 ntBASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 FTH1P20-201ENST00000434913 548 ntBASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 AC093716.1-201ENST00000435923 377 ntBASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 IFNA20P-201ENST00000436840 528 ntBASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 MEMO1P4-201ENST00000453590 386 ntBASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 AC063943.1-201ENST00000465434 453 ntBASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 RN7SL860P-201ENST00000473738 223 ntBASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 RN7SL88P-201ENST00000480166 299 ntBASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 CSF2RA-217ENST00000494969 489 ntTSL 5 BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 DYNLL1P6-201ENST00000503440 264 ntBASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 CDH12P2-201ENST00000504393 298 ntBASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 OR51A1P-201ENST00000511110 946 ntBASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 AC105417.1-201ENST00000514691 285 ntBASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 RN7SKP31-201ENST00000516354 278 ntBASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 AC136618.2-201ENST00000575091 400 ntBASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 AC011840.5-201ENST00000582125 771 ntBASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 RPL27-205ENST00000589037 585 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 ACP5-208ENST00000590420 301 ntTSL 5 BASIC6.95□□□□□ -1.3
CNTNAP3Q9BZ76 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms