Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 SNORA67-201ENST00000384423 137 ntBASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 RPS12P5-201ENST00000423449 371 ntBASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 CYCSP12-201ENST00000437729 300 ntBASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 SCAND3P1-201ENST00000439854 1060 ntBASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 HMGB3P9-201ENST00000441799 583 ntBASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 TRBV8-1-201ENST00000481590 279 ntBASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 AC104971.1-201ENST00000495117 578 ntBASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 PSMA2P2-201ENST00000504319 686 ntBASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 AC011411.1-201ENST00000509592 876 ntBASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 AP002981.1-201ENST00000517692 975 ntBASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 AC026688.1-201ENST00000520639 1168 ntBASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 AC009268.1-201ENST00000561352 1203 ntBASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 MTND6P33-201ENST00000571794 183 ntBASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 AL049794.2-201ENST00000616301 365 ntBASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 AC131238.1-201ENST00000617135 328 ntBASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 MIR7154-201ENST00000620673 73 ntBASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 AL023881.1-201ENST00000621088 301 ntBASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC28BQ9BUN5 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 ECM1P2-201ENST00000503354 1577 ntBASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 SNORA70.10-201ENST00000384515 134 ntBASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 RNA5SP284-201ENST00000384547 118 ntBASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 RN7SKP240-201ENST00000410583 375 ntBASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 RNA5SP104-201ENST00000410989 118 ntBASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 DYNLL1P7-201ENST00000429273 258 ntBASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 AC012497.1-201ENST00000429392 575 ntBASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 Z85994.2-201ENST00000434327 452 ntBASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 CYCSP6-201ENST00000434498 302 ntBASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 AL354714.3-201ENST00000447284 493 ntBASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 NPM1P39-201ENST00000449818 867 ntBASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 TPRKBP1-201ENST00000456243 481 ntBASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 RPS26P28-201ENST00000470806 348 ntBASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 RPL23AP65-201ENST00000475608 468 ntBASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 AC025181.1-201ENST00000477507 416 ntBASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 SNORD46.2-201ENST00000516021 102 ntBASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 AF186190.1-201ENST00000517470 480 ntBASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 CYCSP28-201ENST00000534284 321 ntBASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 AP002884.5-201ENST00000595053 1132 ntBASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 KATNBL1P1-201ENST00000605192 748 ntBASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 AC007620.3-201ENST00000608131 497 ntBASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 AL691477.1-201ENST00000624398 162 ntBASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 IRF5P1-201ENST00000504852 2164 ntBASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC28BQ9BUN5 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 CASC19-255ENST00000641733 1385 ntBASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC28BQ9BUN5 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms