Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 ATAD2-205ENST00000521903 5143 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 NLRP1-208ENST00000571451 5444 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 RNA5SP131-201ENST00000365452 119 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AC083799.1-201ENST00000366451 910 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 MRRF-207ENST00000373729 870 ntTSL 3 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 RNU6-1056P-201ENST00000383996 107 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AC233289.1-201ENST00000403700 508 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AL354719.1-201ENST00000406535 843 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AC127391.1-201ENST00000411737 98 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 MTCO2P21-201ENST00000419780 677 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 UBE2V1P3-201ENST00000439651 417 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 VN1R48P-201ENST00000448149 1036 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 EIF4A2P4-201ENST00000458691 1196 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 RPL23AP72-201ENST00000492447 435 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 YWHAEP4-201ENST00000505390 198 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 ARHGAP20-202ENST00000524756 6180 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AC139103.1-201ENST00000534696 1030 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AL139041.1-201ENST00000605480 610 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AC112220.2-201ENST00000605513 533 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 ALG13-225ENST00000621367 3893 ntTSL 2 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 CTC1-201ENST00000315684 7021 ntAPPRIS P2 TSL 1 (best) BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 LPIN2-201ENST00000261596 6229 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 RGS6-201ENST00000343854 5342 ntTSL 5 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 RN7SKP77-201ENST00000363261 353 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 RNU1-64P-201ENST00000365443 163 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 RN7SKP126-201ENST00000411143 300 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AC114814.2-201ENST00000419195 485 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 RPL35AP12-201ENST00000425362 338 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 HMGB1P9-201ENST00000429856 646 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 MTCYBP31-201ENST00000438855 1122 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AC135721.2-201ENST00000464237 300 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 UBE2DNL-203ENST00000474922 222 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 KLRA1P-201ENST00000503499 986 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AC006499.6-201ENST00000511169 607 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 MYL12AP1-201ENST00000518490 515 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AC107016.1-201ENST00000550463 337 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AC112693.2-201ENST00000556538 232 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 CASC22-201ENST00000569713 386 ntTSL 5 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 DRICH1-202ENST00000614553 687 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AC012150.2-201ENST00000621300 544 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AC092159.4-201ENST00000624944 550 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 SHTN1-207ENST00000615301 6730 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 UBASH3B-201ENST00000284273 6912 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 AC073065.1-201ENST00000411678 2866 ntBASIC1.85□□□□□ -2.11
HMCN1Q96RW7 GIT2-204ENST00000361006 5444 ntTSL 5 BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HMCN1Q96RW7 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms