Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM47Q96LD4 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM47Q96LD4 AC127070.3-201ENST00000503695 3263 ntBASIC7.86□□□□□ -1.15
TRIM47Q96LD4 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM47Q96LD4 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM47Q96LD4 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM47Q96LD4 ZNF840P-201ENST00000504759 1996 ntBASIC7.86□□□□□ -1.15
TRIM47Q96LD4 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM47Q96LD4 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC7.86□□□□□ -1.15
TRIM47Q96LD4 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC7.86□□□□□ -1.15
TRIM47Q96LD4 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC7.86□□□□□ -1.15
TRIM47Q96LD4 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM47Q96LD4 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM47Q96LD4 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM47Q96LD4 RNU6-845P-201ENST00000362578 103 ntBASIC7.86□□□□□ -1.15
TRIM47Q96LD4 RNU6-1017P-201ENST00000363613 106 ntBASIC7.86□□□□□ -1.15
TRIM47Q96LD4 RN7SKP78-201ENST00000364711 318 ntBASIC7.86□□□□□ -1.15
TRIM47Q96LD4 RNA5SP485-201ENST00000365053 119 ntBASIC7.86□□□□□ -1.15
TRIM47Q96LD4 RNA5SP77-201ENST00000365394 120 ntBASIC7.86□□□□□ -1.15
TRIM47Q96LD4 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM47Q96LD4 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.86□□□□□ -1.15
TRIM47Q96LD4 RNU6-767P-201ENST00000384132 107 ntBASIC7.86□□□□□ -1.15
TRIM47Q96LD4 Y_RNA.452-201ENST00000384202 108 ntBASIC7.86□□□□□ -1.15
TRIM47Q96LD4 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM47Q96LD4 RPS7P15-201ENST00000415804 584 ntBASIC7.86□□□□□ -1.15
TRIM47Q96LD4 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM47Q96LD4 PDCL2P1-201ENST00000419302 352 ntBASIC7.86□□□□□ -1.15
TRIM47Q96LD4 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC7.86□□□□□ -1.15
TRIM47Q96LD4 VN1R20P-201ENST00000425215 966 ntBASIC7.86□□□□□ -1.15
TRIM47Q96LD4 RPS29P14-201ENST00000431518 171 ntBASIC7.86□□□□□ -1.15
TRIM47Q96LD4 AL590128.1-201ENST00000433407 286 ntBASIC7.86□□□□□ -1.15
TRIM47Q96LD4 AC110602.1-201ENST00000437414 318 ntBASIC7.86□□□□□ -1.15
TRIM47Q96LD4 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC7.86□□□□□ -1.15
TRIM47Q96LD4 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC7.86□□□□□ -1.15
TRIM47Q96LD4 AC244505.5-201ENST00000443639 207 ntBASIC7.86□□□□□ -1.15
TRIM47Q96LD4 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC7.86□□□□□ -1.15
TRIM47Q96LD4 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC7.86□□□□□ -1.15
TRIM47Q96LD4 PNPLA4P1-201ENST00000458328 305 ntBASIC7.86□□□□□ -1.15
TRIM47Q96LD4 MTND1P3-201ENST00000484956 952 ntBASIC7.86□□□□□ -1.15
TRIM47Q96LD4 CREM-242ENST00000490511 469 ntTSL 2 BASIC7.86□□□□□ -1.15
TRIM47Q96LD4 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC7.86□□□□□ -1.15
TRIM47Q96LD4 SNORA74.1-201ENST00000516320 180 ntBASIC7.86□□□□□ -1.15
TRIM47Q96LD4 Y_RNA.704-201ENST00000516851 102 ntBASIC7.86□□□□□ -1.15
TRIM47Q96LD4 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC7.86□□□□□ -1.15
TRIM47Q96LD4 AC037471.2-201ENST00000564941 598 ntBASIC7.86□□□□□ -1.15
TRIM47Q96LD4 ACTG1P15-201ENST00000570019 1063 ntBASIC7.86□□□□□ -1.15
TRIM47Q96LD4 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC7.86□□□□□ -1.15
TRIM47Q96LD4 APOC2-205ENST00000592257 444 ntTSL 3 BASIC7.86□□□□□ -1.15
TRIM47Q96LD4 VN1R80P-201ENST00000597126 338 ntBASIC7.86□□□□□ -1.15
TRIM47Q96LD4 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC7.86□□□□□ -1.15
TRIM47Q96LD4 AC007687.1-201ENST00000602704 304 ntBASIC7.86□□□□□ -1.15
TRIM47Q96LD4 MTCO3P22-201ENST00000603219 784 ntBASIC7.86□□□□□ -1.15
TRIM47Q96LD4 OR8G7P-201ENST00000616658 848 ntBASIC7.86□□□□□ -1.15
TRIM47Q96LD4 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC7.86□□□□□ -1.15
TRIM47Q96LD4 AC114546.4-201ENST00000624413 369 ntBASIC7.86□□□□□ -1.15
TRIM47Q96LD4 MIR1302-1-201ENST00000637932 143 ntBASIC7.86□□□□□ -1.15
TRIM47Q96LD4 AL354702.2-202ENST00000641481 890 ntBASIC7.86□□□□□ -1.15
TRIM47Q96LD4 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.86□□□□□ -1.15
TRIM47Q96LD4 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM47Q96LD4 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.86□□□□□ -1.15
TRIM47Q96LD4 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM47Q96LD4 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC7.86□□□□□ -1.15
TRIM47Q96LD4 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM47Q96LD4 AL391261.1-201ENST00000555712 1479 ntBASIC7.86□□□□□ -1.15
TRIM47Q96LD4 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC7.86□□□□□ -1.15
TRIM47Q96LD4 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC7.86□□□□□ -1.15
TRIM47Q96LD4 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM47Q96LD4 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC7.86□□□□□ -1.15
TRIM47Q96LD4 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC7.85□□□□□ -1.15
TRIM47Q96LD4 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
TRIM47Q96LD4 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
TRIM47Q96LD4 HSPA8P17-201ENST00000427029 1382 ntBASIC7.85□□□□□ -1.15
TRIM47Q96LD4 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
TRIM47Q96LD4 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
TRIM47Q96LD4 AC092725.2-201ENST00000567658 1389 ntBASIC7.85□□□□□ -1.15
TRIM47Q96LD4 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
TRIM47Q96LD4 SFTPD-AS1-201ENST00000608229 5001 ntBASIC7.85□□□□□ -1.15
TRIM47Q96LD4 AC117529.2-201ENST00000512159 2068 ntBASIC7.85□□□□□ -1.15
TRIM47Q96LD4 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
TRIM47Q96LD4 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC7.85□□□□□ -1.15
TRIM47Q96LD4 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
TRIM47Q96LD4 AC107982.1-201ENST00000507171 1300 ntBASIC7.85□□□□□ -1.15
TRIM47Q96LD4 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
TRIM47Q96LD4 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
TRIM47Q96LD4 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.85□□□□□ -1.15
TRIM47Q96LD4 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
TRIM47Q96LD4 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
TRIM47Q96LD4 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.85□□□□□ -1.15
TRIM47Q96LD4 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC7.85□□□□□ -1.15
TRIM47Q96LD4 Y_RNA.86-201ENST00000363020 111 ntBASIC7.85□□□□□ -1.15
TRIM47Q96LD4 RNU6-560P-201ENST00000364007 108 ntBASIC7.85□□□□□ -1.15
TRIM47Q96LD4 Y_RNA.202-201ENST00000364083 110 ntBASIC7.85□□□□□ -1.15
TRIM47Q96LD4 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
TRIM47Q96LD4 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
TRIM47Q96LD4 RNU6-878P-201ENST00000384578 110 ntBASIC7.85□□□□□ -1.15
TRIM47Q96LD4 RPA3-204ENST00000406109 434 ntTSL 3 BASIC7.85□□□□□ -1.15
TRIM47Q96LD4 HSD17B7P1-201ENST00000412419 1017 ntBASIC7.85□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms