Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 RNA5SP113-201ENST00000410486 84 ntBASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 RPL37P18-201ENST00000411602 243 ntBASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 QRSL1P2-201ENST00000418582 964 ntBASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 AC004074.1-201ENST00000421810 1063 ntBASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 USP9YP9-201ENST00000429406 715 ntBASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 AC000111.2-201ENST00000448200 210 ntBASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 AURKAPS2-201ENST00000454983 333 ntBASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 OR2A3P-201ENST00000493774 953 ntBASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 AL671862.1-201ENST00000515851 349 ntBASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 AL390334.1-201ENST00000556395 450 ntBASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 UBE2FP2-201ENST00000566646 462 ntBASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 AC107993.1-201ENST00000591343 684 ntBASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 AL512782.1-201ENST00000603093 364 ntBASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 AC243960.7-201ENST00000623532 707 ntBASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 SDAD1P1-202ENST00000524156 2051 ntBASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 SAMMSON-213ENST00000641336 1521 ntBASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
FNDC9Q8TBE3 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 AC008758.3-201ENST00000507003 1829 ntBASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 UBBP2-201ENST00000376781 231 ntBASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 AC002524.1-201ENST00000411687 547 ntBASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 RPL5P22-201ENST00000480199 884 ntBASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 AC073358.1-201ENST00000505671 684 ntBASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 CDH12P4-201ENST00000517835 295 ntBASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 CDH12P3-201ENST00000517935 295 ntBASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 CDH12P1-201ENST00000518435 295 ntBASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 AP001880.2-201ENST00000538233 448 ntBASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 AL049839.1-201ENST00000556151 657 ntBASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 AC091042.1-201ENST00000579213 173 ntBASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 AP000919.1-201ENST00000582850 985 ntBASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 AC011453.2-201ENST00000603737 729 ntBASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 AL034374.2-201ENST00000605281 548 ntBASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 AC022106.2-201ENST00000620114 757 ntBASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 CR381572.2-201ENST00000624852 397 ntBASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 AC126323.6-202ENST00000568092 3511 ntBASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 SOCS5P3-201ENST00000425115 1576 ntBASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 TTC39DP-201ENST00000416781 1688 ntBASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.35□□□□□ -1.71
FNDC9Q8TBE3 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
FNDC9Q8TBE3 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.34□□□□□ -1.71
FNDC9Q8TBE3 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
FNDC9Q8TBE3 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
FNDC9Q8TBE3 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.34□□□□□ -1.71
FNDC9Q8TBE3 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
FNDC9Q8TBE3 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.34□□□□□ -1.71
FNDC9Q8TBE3 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms