Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SIMC1Q8NDZ2 AP000676.3-201ENST00000623299 569 ntBASIC5.59□□□□□ -1.51
SIMC1Q8NDZ2 AC098679.5-201ENST00000624394 571 ntBASIC5.59□□□□□ -1.51
SIMC1Q8NDZ2 SNX18P12-201ENST00000624821 759 ntBASIC5.59□□□□□ -1.51
SIMC1Q8NDZ2 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.59□□□□□ -1.51
SIMC1Q8NDZ2 HSPA8P14-201ENST00000552265 1805 ntBASIC5.59□□□□□ -1.51
SIMC1Q8NDZ2 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SIMC1Q8NDZ2 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SIMC1Q8NDZ2 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SIMC1Q8NDZ2 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SIMC1Q8NDZ2 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
SIMC1Q8NDZ2 MRRFP1-201ENST00000435941 1675 ntBASIC5.59□□□□□ -1.52
SIMC1Q8NDZ2 AL161756.3-201ENST00000641216 2071 ntBASIC5.59□□□□□ -1.52
SIMC1Q8NDZ2 MTCO1P11-201ENST00000429111 1528 ntBASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 MTCO1P18-201ENST00000455518 1419 ntBASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 AC093225.1-201ENST00000506867 1408 ntBASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 AC005261.4-201ENST00000600047 1385 ntBASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 AL603750.1-201ENST00000624216 1717 ntBASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 RNU6-1214P-201ENST00000363650 109 ntBASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 RN7SKP69-201ENST00000365390 305 ntBASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 RNU6-192P-201ENST00000391253 100 ntBASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 AL121978.1-201ENST00000402778 359 ntBASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 RN7SKP278-201ENST00000410504 342 ntBASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 AL449283.1-202ENST00000418249 604 ntBASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 HMGB1P49-201ENST00000418882 569 ntBASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 AC104843.2-201ENST00000427666 297 ntBASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 AL390023.1-201ENST00000428836 262 ntBASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 AL353706.1-201ENST00000436728 494 ntBASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 KRT8P51-201ENST00000438938 274 ntBASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 ATP5LP2-201ENST00000440646 311 ntBASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 AL445466.1-201ENST00000448432 357 ntBASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 AL133217.1-201ENST00000450980 425 ntBASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 ATG12P2-201ENST00000456830 416 ntBASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 AC068228.1-201ENST00000461723 211 ntBASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 AC098847.1-201ENST00000473094 348 ntBASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 RPL23AP40-201ENST00000487630 390 ntBASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 RN7SL101P-201ENST00000496350 279 ntBASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 AC117532.1-201ENST00000514638 323 ntBASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 AC023050.2-201ENST00000544968 387 ntBASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 CYCSP38-201ENST00000559840 322 ntBASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 AC090888.1-201ENST00000561335 1141 ntBASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 AC007346.2-201ENST00000564816 892 ntBASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 VN1R84P-201ENST00000593697 235 ntBASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 DEFB131E-202ENST00000602581 683 ntBASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 AC080078.2-201ENST00000603766 501 ntBASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 AP001437.1-201ENST00000608783 456 ntBASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 AL360219.1-201ENST00000610230 366 ntBASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 MIR6768-201ENST00000610734 72 ntBASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 AC090897.3-201ENST00000636973 1157 ntBASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 AL359955.1-201ENST00000455242 3275 ntBASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 AC138907.8-201ENST00000623981 2256 ntBASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.58□□□□□ -1.52
SIMC1Q8NDZ2 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms