Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RFX6Q8HWS3 AC006484.1-201ENST00000435086 1884 ntBASIC5.49□□□□□ -1.53
RFX6Q8HWS3 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RFX6Q8HWS3 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RFX6Q8HWS3 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RFX6Q8HWS3 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
RFX6Q8HWS3 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.48□□□□□ -1.53
RFX6Q8HWS3 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
RFX6Q8HWS3 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RFX6Q8HWS3 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RFX6Q8HWS3 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.48□□□□□ -1.53
RFX6Q8HWS3 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.48□□□□□ -1.53
RFX6Q8HWS3 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
RFX6Q8HWS3 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RFX6Q8HWS3 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RFX6Q8HWS3 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RFX6Q8HWS3 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RFX6Q8HWS3 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RFX6Q8HWS3 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RFX6Q8HWS3 MIR589-201ENST00000385238 99 ntBASIC5.48□□□□□ -1.53
RFX6Q8HWS3 RNU1-77P-201ENST00000390868 162 ntBASIC5.48□□□□□ -1.53
RFX6Q8HWS3 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.48□□□□□ -1.53
RFX6Q8HWS3 SSR1P2-201ENST00000415208 787 ntBASIC5.48□□□□□ -1.53
RFX6Q8HWS3 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.48□□□□□ -1.53
RFX6Q8HWS3 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.48□□□□□ -1.53
RFX6Q8HWS3 PRPF38AP1-201ENST00000451976 933 ntBASIC5.48□□□□□ -1.53
RFX6Q8HWS3 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC5.48□□□□□ -1.53
RFX6Q8HWS3 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.48□□□□□ -1.53
RFX6Q8HWS3 AC079168.1-201ENST00000458741 345 ntBASIC5.48□□□□□ -1.53
RFX6Q8HWS3 SYT14P1-201ENST00000481459 721 ntBASIC5.48□□□□□ -1.53
RFX6Q8HWS3 RPL7P40-201ENST00000481703 745 ntBASIC5.48□□□□□ -1.53
RFX6Q8HWS3 PPIAP19-201ENST00000486414 492 ntBASIC5.48□□□□□ -1.53
RFX6Q8HWS3 RN7SL814P-201ENST00000487715 300 ntBASIC5.48□□□□□ -1.53
RFX6Q8HWS3 TPT1P3-201ENST00000492841 512 ntBASIC5.48□□□□□ -1.53
RFX6Q8HWS3 AC021146.7-201ENST00000509604 775 ntBASIC5.48□□□□□ -1.53
RFX6Q8HWS3 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC5.48□□□□□ -1.53
RFX6Q8HWS3 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RFX6Q8HWS3 RN7SKP265-201ENST00000516448 223 ntBASIC5.48□□□□□ -1.53
RFX6Q8HWS3 TMEM97P2-201ENST00000517841 403 ntBASIC5.48□□□□□ -1.53
RFX6Q8HWS3 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.48□□□□□ -1.53
RFX6Q8HWS3 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.48□□□□□ -1.53
RFX6Q8HWS3 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RFX6Q8HWS3 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.48□□□□□ -1.53
RFX6Q8HWS3 DUX4L52-201ENST00000549363 777 ntBASIC5.48□□□□□ -1.53
RFX6Q8HWS3 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.48□□□□□ -1.53
RFX6Q8HWS3 AC023825.1-201ENST00000566704 1030 ntBASIC5.48□□□□□ -1.53
RFX6Q8HWS3 AC021483.2-201ENST00000567415 758 ntBASIC5.48□□□□□ -1.53
RFX6Q8HWS3 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.48□□□□□ -1.53
RFX6Q8HWS3 CBX3P2-202ENST00000583365 535 ntBASIC5.48□□□□□ -1.53
RFX6Q8HWS3 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.48□□□□□ -1.53
RFX6Q8HWS3 RPP40P2-201ENST00000603596 712 ntBASIC5.48□□□□□ -1.53
RFX6Q8HWS3 AC009597.2-201ENST00000604659 592 ntBASIC5.48□□□□□ -1.53
RFX6Q8HWS3 AL162431.4-201ENST00000604674 411 ntBASIC5.48□□□□□ -1.53
RFX6Q8HWS3 AC073137.1-201ENST00000605636 634 ntBASIC5.48□□□□□ -1.53
RFX6Q8HWS3 AC126175.1-201ENST00000617041 758 ntBASIC5.48□□□□□ -1.53
RFX6Q8HWS3 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
RFX6Q8HWS3 AC004777.1-201ENST00000624317 287 ntBASIC5.48□□□□□ -1.53
RFX6Q8HWS3 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.48□□□□□ -1.53
RFX6Q8HWS3 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
RFX6Q8HWS3 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
RFX6Q8HWS3 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RFX6Q8HWS3 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.48□□□□□ -1.53
RFX6Q8HWS3 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
RFX6Q8HWS3 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
RFX6Q8HWS3 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.47□□□□□ -1.53
RFX6Q8HWS3 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RFX6Q8HWS3 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
RFX6Q8HWS3 AC132825.1-201ENST00000463573 2247 ntBASIC5.47□□□□□ -1.53
RFX6Q8HWS3 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RFX6Q8HWS3 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.47□□□□□ -1.53
RFX6Q8HWS3 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RFX6Q8HWS3 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RFX6Q8HWS3 RNA5SP223-201ENST00000365174 120 ntBASIC5.47□□□□□ -1.53
RFX6Q8HWS3 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.47□□□□□ -1.53
RFX6Q8HWS3 UBE2V1P9-201ENST00000414760 368 ntBASIC5.47□□□□□ -1.53
RFX6Q8HWS3 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.47□□□□□ -1.53
RFX6Q8HWS3 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.47□□□□□ -1.53
RFX6Q8HWS3 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC5.47□□□□□ -1.53
RFX6Q8HWS3 AC002069.1-201ENST00000429649 1159 ntBASIC5.47□□□□□ -1.53
RFX6Q8HWS3 MTCO1P43-201ENST00000431831 488 ntBASIC5.47□□□□□ -1.53
RFX6Q8HWS3 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.47□□□□□ -1.53
RFX6Q8HWS3 CYCSP6-201ENST00000434498 302 ntBASIC5.47□□□□□ -1.53
RFX6Q8HWS3 AL117351.1-201ENST00000438864 766 ntBASIC5.47□□□□□ -1.53
RFX6Q8HWS3 RPS11P7-201ENST00000442125 465 ntBASIC5.47□□□□□ -1.53
RFX6Q8HWS3 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.47□□□□□ -1.53
RFX6Q8HWS3 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.47□□□□□ -1.53
RFX6Q8HWS3 OR52E7P-201ENST00000452394 933 ntBASIC5.47□□□□□ -1.53
RFX6Q8HWS3 AC108161.1-201ENST00000461060 402 ntBASIC5.47□□□□□ -1.53
RFX6Q8HWS3 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.47□□□□□ -1.53
RFX6Q8HWS3 RN7SL189P-201ENST00000468631 289 ntBASIC5.47□□□□□ -1.53
RFX6Q8HWS3 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.47□□□□□ -1.53
RFX6Q8HWS3 EIF1P7-201ENST00000487533 337 ntBASIC5.47□□□□□ -1.53
RFX6Q8HWS3 RN7SL466P-201ENST00000497546 295 ntBASIC5.47□□□□□ -1.53
RFX6Q8HWS3 MTATP6P1-201ENST00000514057 681 ntBASIC5.47□□□□□ -1.53
RFX6Q8HWS3 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.47□□□□□ -1.53
RFX6Q8HWS3 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.47□□□□□ -1.53
RFX6Q8HWS3 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.47□□□□□ -1.53
RFX6Q8HWS3 OR8G5-201ENST00000524943 1041 ntBASIC5.47□□□□□ -1.53
RFX6Q8HWS3 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.47□□□□□ -1.53
RFX6Q8HWS3 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms