Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.07□□□□□ -1.76
KCNIP4Q6PIL6 RPA2P1-201ENST00000556557 721 ntBASIC4.07□□□□□ -1.76
KCNIP4Q6PIL6 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.07□□□□□ -1.76
KCNIP4Q6PIL6 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.07□□□□□ -1.76
KCNIP4Q6PIL6 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.07□□□□□ -1.76
KCNIP4Q6PIL6 AC090236.2-201ENST00000587933 1101 ntBASIC4.07□□□□□ -1.76
KCNIP4Q6PIL6 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC4.07□□□□□ -1.76
KCNIP4Q6PIL6 AC090525.3-201ENST00000605601 189 ntBASIC4.07□□□□□ -1.76
KCNIP4Q6PIL6 AC015849.2-201ENST00000605738 409 ntBASIC4.07□□□□□ -1.76
KCNIP4Q6PIL6 AC025175.1-201ENST00000606482 759 ntBASIC4.07□□□□□ -1.76
KCNIP4Q6PIL6 AC004775.1-201ENST00000607389 753 ntBASIC4.07□□□□□ -1.76
KCNIP4Q6PIL6 AL355816.1-201ENST00000607951 118 ntBASIC4.07□□□□□ -1.76
KCNIP4Q6PIL6 AC110792.4-201ENST00000609843 298 ntBASIC4.07□□□□□ -1.76
KCNIP4Q6PIL6 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC4.07□□□□□ -1.76
KCNIP4Q6PIL6 MIR6721-201ENST00000617181 87 ntBASIC4.07□□□□□ -1.76
KCNIP4Q6PIL6 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.07□□□□□ -1.76
KCNIP4Q6PIL6 AC129778.1-202ENST00000623812 261 ntBASIC4.07□□□□□ -1.76
KCNIP4Q6PIL6 AC024023.1-201ENST00000624530 922 ntBASIC4.07□□□□□ -1.76
KCNIP4Q6PIL6 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC4.07□□□□□ -1.76
KCNIP4Q6PIL6 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.07□□□□□ -1.76
KCNIP4Q6PIL6 AL591379.1-207ENST00000635982 261 ntBASIC4.07□□□□□ -1.76
KCNIP4Q6PIL6 AMYH02020865.1-205ENST00000636189 261 ntBASIC4.07□□□□□ -1.76
KCNIP4Q6PIL6 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.07□□□□□ -1.76
KCNIP4Q6PIL6 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.07□□□□□ -1.76
KCNIP4Q6PIL6 AC023421.1-201ENST00000590535 1785 ntBASIC4.07□□□□□ -1.76
KCNIP4Q6PIL6 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
KCNIP4Q6PIL6 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 AL133268.1-201ENST00000405676 1401 ntBASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 VN2R3P-201ENST00000422626 1412 ntBASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 ZNF90P1-201ENST00000480493 1951 ntBASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 IL6STP1-201ENST00000346911 1020 ntBASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 IGKV7-3-201ENST00000357453 298 ntBASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 RNU6-317P-201ENST00000384031 107 ntBASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 RN7SKP16-201ENST00000410180 299 ntBASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 RPL30P3-201ENST00000424262 333 ntBASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 FABP7P2-201ENST00000429946 379 ntBASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 AC005077.1-201ENST00000449226 375 ntBASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 AC110749.1-201ENST00000462007 357 ntBASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 AC098818.1-201ENST00000478593 252 ntBASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 AC021006.1-201ENST00000489849 553 ntBASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 AC020890.1-201ENST00000491837 504 ntBASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 AC073073.1-201ENST00000493920 463 ntBASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 AC139365.2-201ENST00000517972 253 ntBASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 AC013701.1-201ENST00000522657 465 ntBASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 AC036111.2-201ENST00000533247 901 ntBASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 AC027176.2-201ENST00000559166 746 ntBASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 AC005242.1-201ENST00000585658 438 ntBASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 AC093765.1-201ENST00000603758 881 ntBASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 AL136131.3-201ENST00000607600 188 ntBASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 AC012467.1-201ENST00000607740 256 ntBASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 AL096803.3-201ENST00000609032 532 ntBASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 AL080312.2-201ENST00000613001 630 ntBASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 AC004801.6-201ENST00000616571 978 ntBASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 MIR6823-201ENST00000622118 61 ntBASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 MAPK10-303ENST00000641324 3959 ntBASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
KCNIP4Q6PIL6 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms