Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 AC080188.3-201ENST00000624842 748 ntBASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 LINC01739-205ENST00000641890 573 ntBASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.54□□□□□ -1.52
SNX30Q5VWJ9 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 SAMMSON-213ENST00000641336 1521 ntBASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 TTC39DP-201ENST00000416781 1688 ntBASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 RNU6-609P-201ENST00000365459 107 ntBASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 RNU6-532P-201ENST00000384318 107 ntBASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 AL645927.1-201ENST00000396783 406 ntBASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 ATP5HP3-201ENST00000396994 486 ntBASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 RNU4-74P-201ENST00000411280 161 ntBASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 ARL2BPP3-201ENST00000421226 480 ntBASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 EIF2S2P3-201ENST00000428356 999 ntBASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 DNAJB5P1-201ENST00000454004 806 ntBASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 AP000797.2-201ENST00000475768 606 ntBASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 RN7SKP141-201ENST00000516167 338 ntBASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 OR4R2P-201ENST00000530815 597 ntBASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 OR11J2P-201ENST00000555298 907 ntBASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 AC018552.1-201ENST00000562099 811 ntBASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 MIR7853-201ENST00000584820 132 ntBASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 AC006116.3-201ENST00000592968 361 ntBASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 ZNF92P2-201ENST00000600543 1059 ntBASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 AC073137.1-201ENST00000605636 634 ntBASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 AC012557.1-201ENST00000607115 611 ntBASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 AL021707.7-201ENST00000607991 416 ntBASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 RPSAP73-201ENST00000614820 330 ntBASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 AC011472.4-201ENST00000615848 491 ntBASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 AC068870.2-201ENST00000620635 389 ntBASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.53□□□□□ -1.52
SNX30Q5VWJ9 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 TCP1P3-201ENST00000414406 1498 ntBASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 AC092747.4-201ENST00000620519 1861 ntBASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 RNA5SP305-201ENST00000362665 119 ntBASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 U3.3-201ENST00000362986 216 ntBASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 RNU6-650P-201ENST00000365658 111 ntBASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 RNU6-225P-201ENST00000384613 103 ntBASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 RN7SKP213-201ENST00000410746 298 ntBASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 CTSL3P-202ENST00000412179 788 ntBASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 AC007394.1-201ENST00000421941 531 ntBASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 MORF4L1P7-201ENST00000426038 703 ntBASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 AL160175.1-201ENST00000428124 247 ntBASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 AC124944.2-201ENST00000429866 1242 ntBASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 CBX1P5-201ENST00000475330 559 ntBASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 RPS24P16-201ENST00000497294 392 ntBASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 HIGD1AP18-201ENST00000520730 278 ntBASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 AC022360.1-201ENST00000521058 340 ntBASIC5.52□□□□□ -1.53
SNX30Q5VWJ9 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms