Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 CASC19-284ENST00000642142 1868 ntBASIC3.39□□□□□ -1.87
SYCNQ0VAF6 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 CASC19-204ENST00000641001 2055 ntBASIC3.39□□□□□ -1.87
SYCNQ0VAF6 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 LYST-202ENST00000389794 12985 ntTSL 5 BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 AL589826.1-201ENST00000340697 249 ntBASIC3.39□□□□□ -1.87
SYCNQ0VAF6 RN7SKP113-201ENST00000363891 295 ntBASIC3.39□□□□□ -1.87
SYCNQ0VAF6 RN7SKP224-201ENST00000364140 325 ntBASIC3.39□□□□□ -1.87
SYCNQ0VAF6 RNA5SP242-201ENST00000364171 118 ntBASIC3.39□□□□□ -1.87
SYCNQ0VAF6 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 OR3A2-201ENST00000408891 1076 ntBASIC3.39□□□□□ -1.87
SYCNQ0VAF6 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 AC013429.2-201ENST00000418798 781 ntBASIC3.39□□□□□ -1.87
SYCNQ0VAF6 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 COX6CP13-201ENST00000428703 226 ntBASIC3.39□□□□□ -1.87
SYCNQ0VAF6 MTND4LP14-201ENST00000429447 288 ntBASIC3.39□□□□□ -1.87
SYCNQ0VAF6 RPL7L1P9-201ENST00000431298 745 ntBASIC3.39□□□□□ -1.87
SYCNQ0VAF6 NDUFA5P10-201ENST00000432147 357 ntBASIC3.39□□□□□ -1.87
SYCNQ0VAF6 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 AL645937.3-201ENST00000453647 936 ntBASIC3.39□□□□□ -1.87
SYCNQ0VAF6 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 SETP20-201ENST00000457046 852 ntBASIC3.39□□□□□ -1.87
SYCNQ0VAF6 AC108161.1-201ENST00000461060 402 ntBASIC3.39□□□□□ -1.87
SYCNQ0VAF6 AC021660.1-201ENST00000465006 554 ntBASIC3.39□□□□□ -1.87
SYCNQ0VAF6 AC021205.1-201ENST00000468797 348 ntBASIC3.39□□□□□ -1.87
SYCNQ0VAF6 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 AC096741.1-201ENST00000472250 846 ntBASIC3.39□□□□□ -1.87
SYCNQ0VAF6 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 SIAH1P1-201ENST00000479411 923 ntBASIC3.39□□□□□ -1.87
SYCNQ0VAF6 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 EEF1A1P25-201ENST00000495704 1267 ntBASIC3.39□□□□□ -1.87
SYCNQ0VAF6 AC108693.1-201ENST00000496068 432 ntBASIC3.39□□□□□ -1.87
SYCNQ0VAF6 HMGB1P3-201ENST00000502802 616 ntBASIC3.39□□□□□ -1.87
SYCNQ0VAF6 AC097173.1-201ENST00000505862 819 ntBASIC3.39□□□□□ -1.87
SYCNQ0VAF6 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 AC011411.1-201ENST00000509592 876 ntBASIC3.39□□□□□ -1.87
SYCNQ0VAF6 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 RNA5SP373-201ENST00000517271 95 ntBASIC3.39□□□□□ -1.87
SYCNQ0VAF6 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 AC022882.1-201ENST00000532142 501 ntBASIC3.39□□□□□ -1.87
SYCNQ0VAF6 AC024940.3-201ENST00000538551 316 ntBASIC3.39□□□□□ -1.87
SYCNQ0VAF6 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 AC126177.5-201ENST00000549599 178 ntBASIC3.39□□□□□ -1.87
SYCNQ0VAF6 PDCD6IPP2-207ENST00000566321 1069 ntBASIC3.39□□□□□ -1.87
SYCNQ0VAF6 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 AL049767.1-202ENST00000637826 242 ntBASIC3.39□□□□□ -1.87
SYCNQ0VAF6 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC3.39□□□□□ -1.87
SYCNQ0VAF6 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 AC104118.1-201ENST00000607625 1589 ntBASIC3.38□□□□□ -1.87
SYCNQ0VAF6 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 DDX6P1-205ENST00000441966 1436 ntBASIC3.38□□□□□ -1.87
SYCNQ0VAF6 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC3.38□□□□□ -1.87
SYCNQ0VAF6 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms