Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 RPS3AP23-201ENST00000401762 784 ntBASIC4.75□□□□□ -1.65
CLDN6P56747 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.75□□□□□ -1.65
CLDN6P56747 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.75□□□□□ -1.65
CLDN6P56747 RPS27AP7-201ENST00000422792 455 ntBASIC4.75□□□□□ -1.65
CLDN6P56747 FABP7P1-201ENST00000424004 391 ntBASIC4.75□□□□□ -1.65
CLDN6P56747 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.75□□□□□ -1.65
CLDN6P56747 GTF2IP2-201ENST00000424290 697 ntBASIC4.75□□□□□ -1.65
CLDN6P56747 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.75□□□□□ -1.65
CLDN6P56747 RPEP3-201ENST00000425462 676 ntBASIC4.75□□□□□ -1.65
CLDN6P56747 HMGN2P27-201ENST00000427352 270 ntBASIC4.75□□□□□ -1.65
CLDN6P56747 RPL23AP1-201ENST00000428990 471 ntBASIC4.75□□□□□ -1.65
CLDN6P56747 RPL7AP49-201ENST00000429522 581 ntBASIC4.75□□□□□ -1.65
CLDN6P56747 NRBF2P3-201ENST00000432731 865 ntBASIC4.75□□□□□ -1.65
CLDN6P56747 AL591438.1-201ENST00000433508 581 ntBASIC4.75□□□□□ -1.65
CLDN6P56747 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.75□□□□□ -1.65
CLDN6P56747 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.75□□□□□ -1.65
CLDN6P56747 SNRPFP2-201ENST00000440710 251 ntBASIC4.75□□□□□ -1.65
CLDN6P56747 AC016772.1-201ENST00000444170 1261 ntBASIC4.75□□□□□ -1.65
CLDN6P56747 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.75□□□□□ -1.65
CLDN6P56747 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.75□□□□□ -1.65
CLDN6P56747 TRBV8-1-201ENST00000481590 279 ntBASIC4.75□□□□□ -1.65
CLDN6P56747 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.75□□□□□ -1.65
CLDN6P56747 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.75□□□□□ -1.65
CLDN6P56747 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.75□□□□□ -1.65
CLDN6P56747 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.75□□□□□ -1.65
CLDN6P56747 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.75□□□□□ -1.65
CLDN6P56747 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.75□□□□□ -1.65
CLDN6P56747 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN6P56747 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CLDN6P56747 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.75□□□□□ -1.65
CLDN6P56747 AC103792.1-201ENST00000603591 919 ntBASIC4.75□□□□□ -1.65
CLDN6P56747 QTRT1P1-201ENST00000604344 1078 ntBASIC4.75□□□□□ -1.65
CLDN6P56747 AC010857.1-201ENST00000606398 594 ntBASIC4.75□□□□□ -1.65
CLDN6P56747 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.75□□□□□ -1.65
CLDN6P56747 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.75□□□□□ -1.65
CLDN6P56747 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.75□□□□□ -1.65
CLDN6P56747 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.75□□□□□ -1.65
CLDN6P56747 AC026367.3-201ENST00000619032 590 ntBASIC4.75□□□□□ -1.65
CLDN6P56747 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.75□□□□□ -1.65
CLDN6P56747 AL161637.1-201ENST00000622380 412 ntBASIC4.75□□□□□ -1.65
CLDN6P56747 AC245100.2-201ENST00000454544 1679 ntBASIC4.75□□□□□ -1.65
CLDN6P56747 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN6P56747 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN6P56747 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.75□□□□□ -1.65
CLDN6P56747 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN6P56747 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.75□□□□□ -1.65
CLDN6P56747 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN6P56747 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
CLDN6P56747 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CLDN6P56747 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.74□□□□□ -1.65
CLDN6P56747 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN6P56747 AP005432.1-201ENST00000580891 3485 ntBASIC4.74□□□□□ -1.65
CLDN6P56747 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN6P56747 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.74□□□□□ -1.65
CLDN6P56747 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN6P56747 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
CLDN6P56747 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CLDN6P56747 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.74□□□□□ -1.65
CLDN6P56747 RNA5SP515-201ENST00000364570 118 ntBASIC4.74□□□□□ -1.65
CLDN6P56747 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.74□□□□□ -1.65
CLDN6P56747 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CLDN6P56747 AL049697.2-201ENST00000403708 294 ntBASIC4.74□□□□□ -1.65
CLDN6P56747 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.74□□□□□ -1.65
CLDN6P56747 RNU4-25P-201ENST00000410569 230 ntBASIC4.74□□□□□ -1.65
CLDN6P56747 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.74□□□□□ -1.65
CLDN6P56747 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.74□□□□□ -1.65
CLDN6P56747 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.74□□□□□ -1.65
CLDN6P56747 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.74□□□□□ -1.65
CLDN6P56747 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.74□□□□□ -1.65
CLDN6P56747 AL592293.2-201ENST00000422292 996 ntBASIC4.74□□□□□ -1.65
CLDN6P56747 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.74□□□□□ -1.65
CLDN6P56747 CBX1P1-201ENST00000440184 427 ntBASIC4.74□□□□□ -1.65
CLDN6P56747 AC239367.2-201ENST00000447309 705 ntBASIC4.74□□□□□ -1.65
CLDN6P56747 AC239798.3-201ENST00000454459 408 ntBASIC4.74□□□□□ -1.65
CLDN6P56747 MTND2P28-201ENST00000457540 1044 ntBASIC4.74□□□□□ -1.65
CLDN6P56747 RN7SL814P-201ENST00000487715 300 ntBASIC4.74□□□□□ -1.65
CLDN6P56747 RN7SKP21-201ENST00000516503 220 ntBASIC4.74□□□□□ -1.65
CLDN6P56747 AC134698.5-201ENST00000519444 336 ntBASIC4.74□□□□□ -1.65
CLDN6P56747 AC092709.1-201ENST00000521355 1045 ntBASIC4.74□□□□□ -1.65
CLDN6P56747 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.74□□□□□ -1.65
CLDN6P56747 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.74□□□□□ -1.65
CLDN6P56747 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.74□□□□□ -1.65
CLDN6P56747 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN6P56747 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.74□□□□□ -1.65
CLDN6P56747 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.74□□□□□ -1.65
CLDN6P56747 RPL12P25-202ENST00000598100 674 ntBASIC4.74□□□□□ -1.65
CLDN6P56747 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.74□□□□□ -1.65
CLDN6P56747 AC005962.2-201ENST00000611427 652 ntBASIC4.74□□□□□ -1.65
CLDN6P56747 AC087821.1-201ENST00000623639 567 ntBASIC4.74□□□□□ -1.65
CLDN6P56747 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.74□□□□□ -1.65
CLDN6P56747 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.74□□□□□ -1.65
CLDN6P56747 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLDN6P56747 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.74□□□□□ -1.65
CLDN6P56747 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.74□□□□□ -1.65
CLDN6P56747 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.74□□□□□ -1.65
CLDN6P56747 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CLDN6P56747 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CLDN6P56747 HCFC2P1-201ENST00000392864 1592 ntBASIC4.74□□□□□ -1.65
CLDN6P56747 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
CLDN6P56747 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms