Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
SLC1A1P43005 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5□□□□□ -1.61
SLC1A1P43005 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
SLC1A1P43005 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5□□□□□ -1.61
SLC1A1P43005 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SLC1A1P43005 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5□□□□□ -1.61
SLC1A1P43005 OR56B2P-201ENST00000317102 954 ntBASIC5□□□□□ -1.61
SLC1A1P43005 AL590762.2-201ENST00000395798 571 ntBASIC5□□□□□ -1.61
SLC1A1P43005 AL356968.2-201ENST00000412769 1257 ntBASIC5□□□□□ -1.61
SLC1A1P43005 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5□□□□□ -1.61
SLC1A1P43005 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5□□□□□ -1.61
SLC1A1P43005 AL645608.4-201ENST00000423619 154 ntBASIC5□□□□□ -1.61
SLC1A1P43005 FABP7P1-201ENST00000424004 391 ntBASIC5□□□□□ -1.61
SLC1A1P43005 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5□□□□□ -1.61
SLC1A1P43005 Z80107.2-201ENST00000445127 392 ntBASIC5□□□□□ -1.61
SLC1A1P43005 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5□□□□□ -1.61
SLC1A1P43005 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
SLC1A1P43005 RPL37AP8-201ENST00000494116 276 ntBASIC5□□□□□ -1.61
SLC1A1P43005 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5□□□□□ -1.61
SLC1A1P43005 RNU1-6P-201ENST00000516290 144 ntBASIC5□□□□□ -1.61
SLC1A1P43005 RNU6-943P-201ENST00000516960 98 ntBASIC5□□□□□ -1.61
SLC1A1P43005 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5□□□□□ -1.61
SLC1A1P43005 HAUS8P1-201ENST00000549005 542 ntBASIC5□□□□□ -1.61
SLC1A1P43005 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5□□□□□ -1.61
SLC1A1P43005 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5□□□□□ -1.61
SLC1A1P43005 MIR4489-201ENST00000578869 62 ntBASIC5□□□□□ -1.61
SLC1A1P43005 MIR5699-201ENST00000578903 90 ntBASIC5□□□□□ -1.61
SLC1A1P43005 AC005520.3-201ENST00000602874 370 ntBASIC5□□□□□ -1.61
SLC1A1P43005 AC130352.1-201ENST00000602979 661 ntBASIC5□□□□□ -1.61
SLC1A1P43005 AC087468.1-201ENST00000604365 630 ntBASIC5□□□□□ -1.61
SLC1A1P43005 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SLC1A1P43005 AC093909.5-201ENST00000621839 1799 ntBASIC5□□□□□ -1.61
SLC1A1P43005 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SLC1A1P43005 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
SLC1A1P43005 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SLC1A1P43005 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5□□□□□ -1.61
SLC1A1P43005 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
SLC1A1P43005 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SLC1A1P43005 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.99□□□□□ -1.61
SLC1A1P43005 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.99□□□□□ -1.61
SLC1A1P43005 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.99□□□□□ -1.61
SLC1A1P43005 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.99□□□□□ -1.61
SLC1A1P43005 CHMP1B2P-201ENST00000399581 597 ntBASIC4.99□□□□□ -1.61
SLC1A1P43005 MIR921-201ENST00000401133 56 ntBASIC4.99□□□□□ -1.61
SLC1A1P43005 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.99□□□□□ -1.61
SLC1A1P43005 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SLC1A1P43005 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.99□□□□□ -1.61
SLC1A1P43005 RPL12P43-201ENST00000420608 499 ntBASIC4.99□□□□□ -1.61
SLC1A1P43005 GLUD1P9-201ENST00000420997 1173 ntBASIC4.99□□□□□ -1.61
SLC1A1P43005 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.99□□□□□ -1.61
SLC1A1P43005 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC4.99□□□□□ -1.61
SLC1A1P43005 AC092647.3-201ENST00000443044 633 ntBASIC4.99□□□□□ -1.61
SLC1A1P43005 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.99□□□□□ -1.61
SLC1A1P43005 AC002553.2-201ENST00000453217 340 ntBASIC4.99□□□□□ -1.61
SLC1A1P43005 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SLC1A1P43005 GAPDHP56-201ENST00000506031 988 ntBASIC4.99□□□□□ -1.61
SLC1A1P43005 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SLC1A1P43005 RNA5SP464-201ENST00000516251 108 ntBASIC4.99□□□□□ -1.61
SLC1A1P43005 RNA5SP92-201ENST00000516437 110 ntBASIC4.99□□□□□ -1.61
SLC1A1P43005 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.99□□□□□ -1.61
SLC1A1P43005 MTND2P17-201ENST00000550281 688 ntBASIC4.99□□□□□ -1.61
SLC1A1P43005 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.99□□□□□ -1.61
SLC1A1P43005 MIR3691-201ENST00000578066 90 ntBASIC4.99□□□□□ -1.61
SLC1A1P43005 AC022726.1-201ENST00000587475 207 ntBASIC4.99□□□□□ -1.61
SLC1A1P43005 AC011453.2-201ENST00000603737 729 ntBASIC4.99□□□□□ -1.61
SLC1A1P43005 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.99□□□□□ -1.61
SLC1A1P43005 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.99□□□□□ -1.61
SLC1A1P43005 AC073575.2-201ENST00000614212 627 ntBASIC4.99□□□□□ -1.61
SLC1A1P43005 AC112694.2-201ENST00000623697 768 ntBASIC4.99□□□□□ -1.61
SLC1A1P43005 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.99□□□□□ -1.61
SLC1A1P43005 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.99□□□□□ -1.61
SLC1A1P43005 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SLC1A1P43005 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SLC1A1P43005 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.99□□□□□ -1.61
SLC1A1P43005 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.99□□□□□ -1.61
SLC1A1P43005 CDC27P2-201ENST00000425026 1922 ntBASIC4.99□□□□□ -1.61
SLC1A1P43005 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
SLC1A1P43005 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SLC1A1P43005 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
SLC1A1P43005 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
SLC1A1P43005 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SLC1A1P43005 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
SLC1A1P43005 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.98□□□□□ -1.61
SLC1A1P43005 LINC01355-201ENST00000566551 5444 ntBASIC4.98□□□□□ -1.61
SLC1A1P43005 RNA5SP305-201ENST00000362665 119 ntBASIC4.98□□□□□ -1.61
SLC1A1P43005 MIR765-201ENST00000390226 114 ntBASIC4.98□□□□□ -1.61
SLC1A1P43005 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.98□□□□□ -1.61
SLC1A1P43005 VDAC1P9-201ENST00000412766 841 ntBASIC4.98□□□□□ -1.61
SLC1A1P43005 AL355433.1-201ENST00000422804 300 ntBASIC4.98□□□□□ -1.61
SLC1A1P43005 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SLC1A1P43005 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.98□□□□□ -1.61
SLC1A1P43005 AC073850.1-201ENST00000449243 255 ntBASIC4.98□□□□□ -1.61
SLC1A1P43005 AC234781.3-201ENST00000452540 973 ntBASIC4.98□□□□□ -1.61
SLC1A1P43005 AL645937.3-201ENST00000453647 936 ntBASIC4.98□□□□□ -1.61
SLC1A1P43005 AC022795.1-201ENST00000473808 480 ntBASIC4.98□□□□□ -1.61
SLC1A1P43005 AC104971.1-201ENST00000495117 578 ntBASIC4.98□□□□□ -1.61
SLC1A1P43005 AC025164.1-201ENST00000496249 478 ntBASIC4.98□□□□□ -1.61
SLC1A1P43005 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SLC1A1P43005 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.98□□□□□ -1.61
SLC1A1P43005 RFPL4AP3-201ENST00000515267 345 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms