Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HOXC12P31275 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC5.95□□□□□ -1.46
HOXC12P31275 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HOXC12P31275 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HOXC12P31275 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HOXC12P31275 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.95□□□□□ -1.46
HOXC12P31275 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HOXC12P31275 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.95□□□□□ -1.46
HOXC12P31275 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
HOXC12P31275 CDR1-202ENST00000625883 1485 ntBASIC5.95□□□□□ -1.46
HOXC12P31275 SMG1P7-201ENST00000565246 2704 ntBASIC5.95□□□□□ -1.46
HOXC12P31275 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
HOXC12P31275 EIF3EP1-201ENST00000433978 1316 ntBASIC5.95□□□□□ -1.46
HOXC12P31275 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.95□□□□□ -1.46
HOXC12P31275 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HOXC12P31275 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
HOXC12P31275 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HOXC12P31275 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HOXC12P31275 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HOXC12P31275 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HOXC12P31275 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC12P31275 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC12P31275 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC12P31275 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC12P31275 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC12P31275 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC12P31275 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.94□□□□□ -1.46
HOXC12P31275 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC12P31275 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC12P31275 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.94□□□□□ -1.46
HOXC12P31275 SMG1P5-202ENST00000529428 4219 ntBASIC5.94□□□□□ -1.46
HOXC12P31275 SMG1P2-201ENST00000566127 4221 ntBASIC5.94□□□□□ -1.46
HOXC12P31275 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC12P31275 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
HOXC12P31275 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC12P31275 AC022819.1-201ENST00000563495 3910 ntBASIC5.94□□□□□ -1.46
HOXC12P31275 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC12P31275 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC12P31275 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
HOXC12P31275 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC12P31275 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC12P31275 RNA5SP188-201ENST00000362916 129 ntBASIC5.94□□□□□ -1.46
HOXC12P31275 RNA5SP88-201ENST00000365560 109 ntBASIC5.94□□□□□ -1.46
HOXC12P31275 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC12P31275 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC12P31275 SNORA51.12-201ENST00000384448 134 ntBASIC5.94□□□□□ -1.46
HOXC12P31275 SNORD116-23-201ENST00000384645 92 ntBASIC5.94□□□□□ -1.46
HOXC12P31275 UBBP1-201ENST00000392399 473 ntBASIC5.94□□□□□ -1.46
HOXC12P31275 AC007066.1-201ENST00000392902 381 ntBASIC5.94□□□□□ -1.46
HOXC12P31275 EI24P3-201ENST00000399046 1062 ntBASIC5.94□□□□□ -1.46
HOXC12P31275 MIR541-201ENST00000401360 84 ntBASIC5.94□□□□□ -1.46
HOXC12P31275 RN7SKP33-201ENST00000410942 340 ntBASIC5.94□□□□□ -1.46
HOXC12P31275 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC5.94□□□□□ -1.46
HOXC12P31275 BOLA3P4-201ENST00000418151 400 ntBASIC5.94□□□□□ -1.46
HOXC12P31275 RPS27AP7-201ENST00000422792 455 ntBASIC5.94□□□□□ -1.46
HOXC12P31275 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.94□□□□□ -1.46
HOXC12P31275 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC5.94□□□□□ -1.46
HOXC12P31275 AC239367.3-201ENST00000428996 814 ntBASIC5.94□□□□□ -1.46
HOXC12P31275 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC5.94□□□□□ -1.46
HOXC12P31275 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.94□□□□□ -1.46
HOXC12P31275 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.94□□□□□ -1.46
HOXC12P31275 MTATP6P23-201ENST00000440153 476 ntBASIC5.94□□□□□ -1.46
HOXC12P31275 AL592447.1-201ENST00000447592 540 ntBASIC5.94□□□□□ -1.46
HOXC12P31275 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC5.94□□□□□ -1.46
HOXC12P31275 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
HOXC12P31275 RPL23AP71-201ENST00000470966 469 ntBASIC5.94□□□□□ -1.46
HOXC12P31275 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.94□□□□□ -1.46
HOXC12P31275 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC5.94□□□□□ -1.46
HOXC12P31275 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC5.94□□□□□ -1.46
HOXC12P31275 RPL37P25-201ENST00000507308 276 ntBASIC5.94□□□□□ -1.46
HOXC12P31275 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC12P31275 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.94□□□□□ -1.46
HOXC12P31275 AC116347.2-201ENST00000514912 523 ntBASIC5.94□□□□□ -1.46
HOXC12P31275 RN7SKP283-201ENST00000517197 270 ntBASIC5.94□□□□□ -1.46
HOXC12P31275 HMGB1P42-201ENST00000532126 553 ntBASIC5.94□□□□□ -1.46
HOXC12P31275 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC5.94□□□□□ -1.46
HOXC12P31275 TRAV15-201ENST00000556680 249 ntBASIC5.94□□□□□ -1.46
HOXC12P31275 AC026826.3-201ENST00000561747 158 ntBASIC5.94□□□□□ -1.46
HOXC12P31275 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.94□□□□□ -1.46
HOXC12P31275 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC5.94□□□□□ -1.46
HOXC12P31275 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.94□□□□□ -1.46
HOXC12P31275 AC020914.6-201ENST00000594327 272 ntBASIC5.94□□□□□ -1.46
HOXC12P31275 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC5.94□□□□□ -1.46
HOXC12P31275 SEPT14P19-203ENST00000633205 211 ntBASIC5.94□□□□□ -1.46
HOXC12P31275 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC12P31275 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.94□□□□□ -1.46
HOXC12P31275 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
HOXC12P31275 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC12P31275 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC5.94□□□□□ -1.46
HOXC12P31275 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.94□□□□□ -1.46
HOXC12P31275 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.94□□□□□ -1.46
HOXC12P31275 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC12P31275 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC12P31275 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC12P31275 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC12P31275 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HOXC12P31275 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.94□□□□□ -1.46
HOXC12P31275 MTCO1P23-201ENST00000415223 1526 ntBASIC5.94□□□□□ -1.46
HOXC12P31275 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.94□□□□□ -1.46
HOXC12P31275 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms