Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC004817.4-201ENST00000602396 3625 ntBASIC5.57□□□□□ -1.52
COL2A1P02458 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.57□□□□□ -1.52
COL2A1P02458 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL2A1P02458 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
COL2A1P02458 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
COL2A1P02458 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL2A1P02458 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL2A1P02458 OR14L1P-202ENST00000641545 3009 ntBASIC5.57□□□□□ -1.52
COL2A1P02458 SNORA11F-201ENST00000408237 128 ntBASIC5.57□□□□□ -1.52
COL2A1P02458 AC006065.1-201ENST00000422539 802 ntBASIC5.57□□□□□ -1.52
COL2A1P02458 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.57□□□□□ -1.52
COL2A1P02458 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
COL2A1P02458 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL2A1P02458 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.57□□□□□ -1.52
COL2A1P02458 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.57□□□□□ -1.52
COL2A1P02458 OR8G5-201ENST00000524943 1041 ntBASIC5.57□□□□□ -1.52
COL2A1P02458 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.57□□□□□ -1.52
COL2A1P02458 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
COL2A1P02458 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.57□□□□□ -1.52
COL2A1P02458 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL2A1P02458 VN1R85P-201ENST00000601587 426 ntBASIC5.57□□□□□ -1.52
COL2A1P02458 AC093765.1-201ENST00000603758 881 ntBASIC5.57□□□□□ -1.52
COL2A1P02458 OR7A19P-201ENST00000608051 733 ntBASIC5.57□□□□□ -1.52
COL2A1P02458 AL136370.1-201ENST00000608166 691 ntBASIC5.57□□□□□ -1.52
COL2A1P02458 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.57□□□□□ -1.52
COL2A1P02458 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.57□□□□□ -1.52
COL2A1P02458 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.57□□□□□ -1.52
COL2A1P02458 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL2A1P02458 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.57□□□□□ -1.52
COL2A1P02458 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
COL2A1P02458 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.56□□□□□ -1.52
COL2A1P02458 AP000756.2-201ENST00000624168 2567 ntBASIC5.56□□□□□ -1.52
COL2A1P02458 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.56□□□□□ -1.52
COL2A1P02458 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL2A1P02458 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.56□□□□□ -1.52
COL2A1P02458 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.56□□□□□ -1.52
COL2A1P02458 CCT8P1-201ENST00000413611 1657 ntBASIC5.56□□□□□ -1.52
COL2A1P02458 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL2A1P02458 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL2A1P02458 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL2A1P02458 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
COL2A1P02458 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL2A1P02458 RNA5SP44-201ENST00000410446 133 ntBASIC5.56□□□□□ -1.52
COL2A1P02458 AL451062.2-201ENST00000427515 271 ntBASIC5.56□□□□□ -1.52
COL2A1P02458 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.56□□□□□ -1.52
COL2A1P02458 Z95152.1-201ENST00000453556 656 ntBASIC5.56□□□□□ -1.52
COL2A1P02458 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.56□□□□□ -1.52
COL2A1P02458 CYCSP29-201ENST00000533731 318 ntBASIC5.56□□□□□ -1.52
COL2A1P02458 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.56□□□□□ -1.52
COL2A1P02458 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.56□□□□□ -1.52
COL2A1P02458 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL2A1P02458 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL2A1P02458 AC027216.1-201ENST00000577726 685 ntBASIC5.56□□□□□ -1.52
COL2A1P02458 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.56□□□□□ -1.52
COL2A1P02458 AL031658.2-201ENST00000616850 651 ntBASIC5.56□□□□□ -1.52
COL2A1P02458 AC011815.3-201ENST00000624194 473 ntBASIC5.56□□□□□ -1.52
COL2A1P02458 AC008785.1-201ENST00000624475 456 ntBASIC5.56□□□□□ -1.52
COL2A1P02458 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.56□□□□□ -1.52
COL2A1P02458 AC097063.1-201ENST00000426714 1797 ntBASIC5.56□□□□□ -1.52
COL2A1P02458 AL034370.1-201ENST00000397254 1590 ntBASIC5.56□□□□□ -1.52
COL2A1P02458 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
COL2A1P02458 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.55□□□□□ -1.52
COL2A1P02458 AL031119.1-201ENST00000404707 1879 ntBASIC5.55□□□□□ -1.52
COL2A1P02458 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL2A1P02458 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
COL2A1P02458 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
COL2A1P02458 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
COL2A1P02458 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
COL2A1P02458 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
COL2A1P02458 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL2A1P02458 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.55□□□□□ -1.52
COL2A1P02458 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.55□□□□□ -1.52
COL2A1P02458 LINC01881-201ENST00000416103 412 ntBASIC5.55□□□□□ -1.52
COL2A1P02458 AC093166.2-201ENST00000455969 1017 ntBASIC5.55□□□□□ -1.52
COL2A1P02458 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.55□□□□□ -1.52
COL2A1P02458 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.55□□□□□ -1.52
COL2A1P02458 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.55□□□□□ -1.52
COL2A1P02458 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
COL2A1P02458 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.55□□□□□ -1.52
COL2A1P02458 AC068831.4-201ENST00000556118 109 ntBASIC5.55□□□□□ -1.52
COL2A1P02458 AC090953.1-201ENST00000604305 1092 ntBASIC5.55□□□□□ -1.52
COL2A1P02458 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL2A1P02458 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.55□□□□□ -1.52
COL2A1P02458 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL2A1P02458 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL2A1P02458 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.55□□□□□ -1.52
COL2A1P02458 AC135352.1-201ENST00000506173 1418 ntBASIC5.55□□□□□ -1.52
COL2A1P02458 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.55□□□□□ -1.52
COL2A1P02458 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
COL2A1P02458 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL2A1P02458 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL2A1P02458 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
COL2A1P02458 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL2A1P02458 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL2A1P02458 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL2A1P02458 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL2A1P02458 RNA5SP447-201ENST00000363749 119 ntBASIC5.54□□□□□ -1.52
COL2A1P02458 RNA5SP28-201ENST00000363841 119 ntBASIC5.54□□□□□ -1.52
COL2A1P02458 SDHCP2-201ENST00000398565 501 ntBASIC5.54□□□□□ -1.52
COL2A1P02458 AP000580.1-201ENST00000404439 358 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 151.2 ms