Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 NPM1P29-201ENST00000483112 803 ntBASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 AP006289.1-201ENST00000538089 277 ntBASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC011626.1-201ENST00000604710 562 ntBASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC012414.7-202ENST00000622705 1090 ntBASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TMX2-CTNND1H3BSU7 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.64
TMX2-CTNND1H3BSU7 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.84□□□□□ -1.64
TMX2-CTNND1H3BSU7 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
TMX2-CTNND1H3BSU7 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
TMX2-CTNND1H3BSU7 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.84□□□□□ -1.64
TMX2-CTNND1H3BSU7 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 RNU6-398P-201ENST00000384143 109 ntBASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 RPS3AP23-201ENST00000401762 784 ntBASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 RNA5SP296-201ENST00000410523 111 ntBASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 AC068287.1-201ENST00000430283 295 ntBASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 RHOT1P3-201ENST00000436571 331 ntBASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 RPL7AP61-201ENST00000443410 636 ntBASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 RPL21P133-201ENST00000443666 476 ntBASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 CYCSP24-201ENST00000445119 316 ntBASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 AC020779.1-201ENST00000478757 796 ntBASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 AC093267.1-201ENST00000489176 961 ntBASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 AC011005.3-201ENST00000491624 395 ntBASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 AC010350.1-201ENST00000504908 231 ntBASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 IGKV2D-10-201ENST00000520194 281 ntBASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 MIR4284-201ENST00000578924 81 ntBASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 MIR4697-201ENST00000582977 78 ntBASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 AL023583.1-201ENST00000607518 1143 ntBASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 AL731566.2-201ENST00000618971 317 ntBASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 MIR6810-201ENST00000622701 70 ntBASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 AP000346.3-201ENST00000622821 210 ntBASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 AC026523.2-201ENST00000625039 7739 ntBASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 Z95331.1-201ENST00000623075 23112 ntBASIC4.83□□□□□ -1.64
TMX2-CTNND1H3BSU7 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TMX2-CTNND1H3BSU7 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
TMX2-CTNND1H3BSU7 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TMX2-CTNND1H3BSU7 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.82□□□□□ -1.64
TMX2-CTNND1H3BSU7 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TMX2-CTNND1H3BSU7 AC099654.2-201ENST00000433031 1980 ntBASIC4.82□□□□□ -1.64
TMX2-CTNND1H3BSU7 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TMX2-CTNND1H3BSU7 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TMX2-CTNND1H3BSU7 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.82□□□□□ -1.64
TMX2-CTNND1H3BSU7 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.82□□□□□ -1.64
TMX2-CTNND1H3BSU7 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
TMX2-CTNND1H3BSU7 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TMX2-CTNND1H3BSU7 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.82□□□□□ -1.64
TMX2-CTNND1H3BSU7 AC019050.1-201ENST00000418508 492 ntBASIC4.82□□□□□ -1.64
TMX2-CTNND1H3BSU7 AC092570.3-201ENST00000420113 693 ntBASIC4.82□□□□□ -1.64
TMX2-CTNND1H3BSU7 E2F6P2-201ENST00000420708 748 ntBASIC4.82□□□□□ -1.64
TMX2-CTNND1H3BSU7 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.82□□□□□ -1.64
TMX2-CTNND1H3BSU7 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.82□□□□□ -1.64
TMX2-CTNND1H3BSU7 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.82□□□□□ -1.64
TMX2-CTNND1H3BSU7 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.82□□□□□ -1.64
TMX2-CTNND1H3BSU7 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.82□□□□□ -1.64
TMX2-CTNND1H3BSU7 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
TMX2-CTNND1H3BSU7 AC008897.1-201ENST00000494006 347 ntBASIC4.82□□□□□ -1.64
TMX2-CTNND1H3BSU7 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.82□□□□□ -1.64
TMX2-CTNND1H3BSU7 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.82□□□□□ -1.64
TMX2-CTNND1H3BSU7 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.82□□□□□ -1.64
TMX2-CTNND1H3BSU7 AC138938.1-201ENST00000515431 782 ntBASIC4.82□□□□□ -1.64
TMX2-CTNND1H3BSU7 HNRNPRP2-201ENST00000528421 743 ntBASIC4.82□□□□□ -1.64
TMX2-CTNND1H3BSU7 OR5AN2P-201ENST00000534535 896 ntBASIC4.82□□□□□ -1.64
TMX2-CTNND1H3BSU7 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TMX2-CTNND1H3BSU7 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.82□□□□□ -1.64
TMX2-CTNND1H3BSU7 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TMX2-CTNND1H3BSU7 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.82□□□□□ -1.64
TMX2-CTNND1H3BSU7 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.82□□□□□ -1.64
TMX2-CTNND1H3BSU7 CR381572.2-201ENST00000624852 397 ntBASIC4.82□□□□□ -1.64
TMX2-CTNND1H3BSU7 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.82□□□□□ -1.64
TMX2-CTNND1H3BSU7 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.82□□□□□ -1.64
TMX2-CTNND1H3BSU7 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.82□□□□□ -1.64
TMX2-CTNND1H3BSU7 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TMX2-CTNND1H3BSU7 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms