Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 DDX18P5-201ENST00000534547 1306 ntBASIC3.92□□□□□ -1.78
TCRBV4S1A1TA0A5B7 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 AP000580.1-201ENST00000404439 358 ntBASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 SNORA77-201ENST00000408716 125 ntBASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 Y_RNA.625-201ENST00000411256 107 ntBASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 AF186996.5-201ENST00000418098 904 ntBASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 CKS1BP6-201ENST00000424932 240 ntBASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 USP9YP9-201ENST00000429406 715 ntBASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 FABP7P2-201ENST00000429946 379 ntBASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 RPS26P4-201ENST00000431743 355 ntBASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 AC092162.1-201ENST00000432828 434 ntBASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 NMNAT1P2-201ENST00000435192 860 ntBASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 RPS29P9-201ENST00000440360 171 ntBASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 AC073052.1-201ENST00000440417 714 ntBASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 MRPL48P1-201ENST00000445390 636 ntBASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 IGHV5-78-201ENST00000450948 295 ntBASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 HMGB1P4-201ENST00000455362 567 ntBASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 RPS17P2-201ENST00000461663 408 ntBASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 RPS29P22-201ENST00000472363 168 ntBASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 RNA5SP464-201ENST00000516251 108 ntBASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 AC008147.3-201ENST00000548666 354 ntBASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 AC009117.1-201ENST00000563948 554 ntBASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 BGLT3-201ENST00000564523 994 ntBASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 AC097505.1-201ENST00000610199 565 ntBASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 AL122125.1-201ENST00000616999 600 ntBASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 CASC19-206ENST00000641028 1430 ntBASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 AC099654.2-201ENST00000433031 1980 ntBASIC3.91□□□□□ -1.78
TCRBV4S1A1TA0A5B7 AL359922.3-201ENST00000624779 1670 ntBASIC3.9□□□□□ -1.78
TCRBV4S1A1TA0A5B7 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
TCRBV4S1A1TA0A5B7 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
TCRBV4S1A1TA0A5B7 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC3.9□□□□□ -1.78
TCRBV4S1A1TA0A5B7 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
TCRBV4S1A1TA0A5B7 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
TCRBV4S1A1TA0A5B7 LINC01355-201ENST00000566551 5444 ntBASIC3.9□□□□□ -1.78
TCRBV4S1A1TA0A5B7 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
TCRBV4S1A1TA0A5B7 GNAS-202ENST00000306090 477 ntTSL 5 BASIC3.9□□□□□ -1.79
TCRBV4S1A1TA0A5B7 SNORA70.10-201ENST00000384515 134 ntBASIC3.9□□□□□ -1.79
TCRBV4S1A1TA0A5B7 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
TCRBV4S1A1TA0A5B7 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AL445213.1-201ENST00000412589 747 ntBASIC3.9□□□□□ -1.79
TCRBV4S1A1TA0A5B7 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC3.9□□□□□ -1.79
TCRBV4S1A1TA0A5B7 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC3.9□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.9□□□□□ -1.79
TCRBV4S1A1TA0A5B7 TCEA1P1-201ENST00000449716 880 ntBASIC3.9□□□□□ -1.79
TCRBV4S1A1TA0A5B7 RHEBP2-201ENST00000450289 600 ntBASIC3.9□□□□□ -1.79
TCRBV4S1A1TA0A5B7 OR52J1P-201ENST00000450596 932 ntBASIC3.9□□□□□ -1.79
TCRBV4S1A1TA0A5B7 RN7SL517P-201ENST00000462240 305 ntBASIC3.9□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC063943.1-201ENST00000465434 453 ntBASIC3.9□□□□□ -1.79
TCRBV4S1A1TA0A5B7 RN7SL205P-201ENST00000490174 284 ntBASIC3.9□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC3.9□□□□□ -1.79
TCRBV4S1A1TA0A5B7 HMGB1P19-201ENST00000517578 577 ntBASIC3.9□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC012339.2-201ENST00000523996 453 ntBASIC3.9□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC3.9□□□□□ -1.79
TCRBV4S1A1TA0A5B7 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.9□□□□□ -1.79
TCRBV4S1A1TA0A5B7 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.9□□□□□ -1.79
TCRBV4S1A1TA0A5B7 MIR4270-201ENST00000581799 70 ntBASIC3.9□□□□□ -1.79
TCRBV4S1A1TA0A5B7 RN7SL52P-201ENST00000584271 284 ntBASIC3.9□□□□□ -1.79
TCRBV4S1A1TA0A5B7 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC3.9□□□□□ -1.79
TCRBV4S1A1TA0A5B7 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC3.9□□□□□ -1.79
TCRBV4S1A1TA0A5B7 RN7SL722P-201ENST00000617780 284 ntBASIC3.9□□□□□ -1.79
TCRBV4S1A1TA0A5B7 RN7SL565P-201ENST00000618246 284 ntBASIC3.9□□□□□ -1.79
TCRBV4S1A1TA0A5B7 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC3.9□□□□□ -1.79
TCRBV4S1A1TA0A5B7 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TCRBV4S1A1TA0A5B7 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
TCRBV4S1A1TA0A5B7 AC012618.3-205ENST00000637896 1496 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms