Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 RNA5SP187-201ENST00000384400 119 ntBASIC5.08□□□□□ -1.6
SMIM28A0A1B0GU29 RNA5SP397-201ENST00000391323 118 ntBASIC5.08□□□□□ -1.6
SMIM28A0A1B0GU29 ARL4AP5-201ENST00000404372 599 ntBASIC5.08□□□□□ -1.6
SMIM28A0A1B0GU29 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.08□□□□□ -1.6
SMIM28A0A1B0GU29 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.08□□□□□ -1.6
SMIM28A0A1B0GU29 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.08□□□□□ -1.6
SMIM28A0A1B0GU29 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.08□□□□□ -1.6
SMIM28A0A1B0GU29 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.08□□□□□ -1.6
SMIM28A0A1B0GU29 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.08□□□□□ -1.6
SMIM28A0A1B0GU29 OR52A4P-201ENST00000472867 958 ntBASIC5.08□□□□□ -1.6
SMIM28A0A1B0GU29 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.08□□□□□ -1.6
SMIM28A0A1B0GU29 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.08□□□□□ -1.6
SMIM28A0A1B0GU29 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.08□□□□□ -1.6
SMIM28A0A1B0GU29 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.08□□□□□ -1.6
SMIM28A0A1B0GU29 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SMIM28A0A1B0GU29 OR8G7P-201ENST00000616658 848 ntBASIC5.08□□□□□ -1.6
SMIM28A0A1B0GU29 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SMIM28A0A1B0GU29 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SMIM28A0A1B0GU29 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SMIM28A0A1B0GU29 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SMIM28A0A1B0GU29 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.08□□□□□ -1.6
SMIM28A0A1B0GU29 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SMIM28A0A1B0GU29 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
SMIM28A0A1B0GU29 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.08□□□□□ -1.6
SMIM28A0A1B0GU29 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SMIM28A0A1B0GU29 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 MIR141-201ENST00000384975 95 ntBASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 E2F6P2-201ENST00000420708 748 ntBASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 HMGB1P32-201ENST00000425971 565 ntBASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 AC068287.1-201ENST00000430283 295 ntBASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 SNRPCP3-201ENST00000474888 476 ntBASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 AK3P4-201ENST00000504283 583 ntBASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 OR51K1P-201ENST00000510214 950 ntBASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 NPM1P21-201ENST00000513394 762 ntBASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 AC092593.2-201ENST00000513866 913 ntBASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 AC087477.6-201ENST00000559595 843 ntBASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 AC090286.3-201ENST00000573133 187 ntBASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 CYCSP40-201ENST00000575927 294 ntBASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 MIR4660-201ENST00000583549 74 ntBASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 AP001542.1-201ENST00000591314 200 ntBASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 AC073137.1-201ENST00000605636 634 ntBASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 AC019193.2-201ENST00000610012 634 ntBASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 AC239803.2-201ENST00000610161 430 ntBASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
SMIM28A0A1B0GU29 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 AL121950.1-201ENST00000624993 2077 ntBASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 AC008549.2-201ENST00000333482 706 ntBASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 U3.35-201ENST00000408405 208 ntBASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 TMBIM7P-201ENST00000418074 855 ntBASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 AC006065.1-201ENST00000422539 802 ntBASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 DNAJC19P7-201ENST00000428811 344 ntBASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 RPL23AP1-201ENST00000428990 471 ntBASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 NPM1P48-201ENST00000436002 853 ntBASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 snoU13.1-201ENST00000459157 104 ntBASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 AC135999.1-201ENST00000478962 479 ntBASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 RN7SL346P-201ENST00000491561 294 ntBASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 RPL36AP41-201ENST00000493820 306 ntBASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 RAB9BP1-201ENST00000519581 626 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms