Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 RNU6-1120P-201ENST00000362988 108 ntBASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 Y_RNA.315-201ENST00000365117 102 ntBASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 MUC1-209ENST00000368396 516 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 SNORA69-201ENST00000383895 132 ntBASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 Y_RNA.474-201ENST00000384341 102 ntBASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 RNU6-456P-201ENST00000384493 107 ntBASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 RPL7P25-201ENST00000404151 721 ntBASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 IL6-206ENST00000407492 926 ntTSL 3 BASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 AC009161.1-201ENST00000417306 376 ntBASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 AC083855.1-201ENST00000440041 258 ntBASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 MRPL50P4-201ENST00000446432 475 ntBASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 MED28P7-201ENST00000456611 530 ntBASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 AC005550.2-201ENST00000476382 318 ntBASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 RPSAP51-201ENST00000497462 645 ntBASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 AC009567.2-201ENST00000502989 349 ntBASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 APOBEC3AP1-201ENST00000511396 287 ntBASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 RNU6-277P-201ENST00000516272 106 ntBASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 RNU7-30P-201ENST00000516835 62 ntBASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 AP003181.2-201ENST00000528941 181 ntBASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 PDCD5P1-201ENST00000543528 309 ntBASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 AC107958.1-201ENST00000556576 290 ntBASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 AC005668.1-201ENST00000571142 476 ntBASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 AC007151.1-201ENST00000572774 483 ntBASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 AL078601.3-201ENST00000573303 535 ntBASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 AL451085.1-201ENST00000604546 690 ntBASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 AC113139.1-201ENST00000605049 239 ntBASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 AL133215.3-201ENST00000609801 448 ntBASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 AC009161.2-201ENST00000624626 138 ntBASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 AL590396.3-201ENST00000636334 300 ntBASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 AC138627.1-203ENST00000641872 1680 ntBASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
LIMD1Q9UGP4 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
LIMD1Q9UGP4 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC7.61□□□□□ -1.19
LIMD1Q9UGP4 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LIMD1Q9UGP4 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LIMD1Q9UGP4 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LIMD1Q9UGP4 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LIMD1Q9UGP4 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LIMD1Q9UGP4 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC7.61□□□□□ -1.19
LIMD1Q9UGP4 ACTR3BP2-202ENST00000623630 1338 ntBASIC7.61□□□□□ -1.19
LIMD1Q9UGP4 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
LIMD1Q9UGP4 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.61□□□□□ -1.19
LIMD1Q9UGP4 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LIMD1Q9UGP4 AFP-201ENST00000226359 1914 ntTSL 5 BASIC7.61□□□□□ -1.19
LIMD1Q9UGP4 Y_RNA.138-201ENST00000363462 102 ntBASIC7.61□□□□□ -1.19
LIMD1Q9UGP4 RNU6-657P-201ENST00000383904 107 ntBASIC7.61□□□□□ -1.19
LIMD1Q9UGP4 Y_RNA.422-201ENST00000384054 114 ntBASIC7.61□□□□□ -1.19
LIMD1Q9UGP4 SNORA70.8-201ENST00000384231 136 ntBASIC7.61□□□□□ -1.19
LIMD1Q9UGP4 RNU6-738P-201ENST00000384531 106 ntBASIC7.61□□□□□ -1.19
LIMD1Q9UGP4 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LIMD1Q9UGP4 AL356967.1-201ENST00000406305 431 ntBASIC7.61□□□□□ -1.19
LIMD1Q9UGP4 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC7.61□□□□□ -1.19
LIMD1Q9UGP4 AC013429.2-201ENST00000418798 781 ntBASIC7.61□□□□□ -1.19
LIMD1Q9UGP4 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
LIMD1Q9UGP4 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC7.61□□□□□ -1.19
LIMD1Q9UGP4 AC092601.1-201ENST00000444526 383 ntBASIC7.61□□□□□ -1.19
LIMD1Q9UGP4 SS18L2P1-201ENST00000445923 213 ntBASIC7.61□□□□□ -1.19
LIMD1Q9UGP4 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC7.61□□□□□ -1.19
LIMD1Q9UGP4 HMGN3P1-201ENST00000453847 193 ntBASIC7.61□□□□□ -1.19
LIMD1Q9UGP4 AC098818.1-201ENST00000478593 252 ntBASIC7.61□□□□□ -1.19
LIMD1Q9UGP4 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC7.61□□□□□ -1.19
LIMD1Q9UGP4 AC008496.1-201ENST00000509131 295 ntBASIC7.61□□□□□ -1.19
LIMD1Q9UGP4 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC7.61□□□□□ -1.19
LIMD1Q9UGP4 RNA5SP473-201ENST00000516402 125 ntBASIC7.61□□□□□ -1.19
LIMD1Q9UGP4 SNORD60.2-201ENST00000516883 86 ntBASIC7.61□□□□□ -1.19
LIMD1Q9UGP4 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC7.61□□□□□ -1.19
LIMD1Q9UGP4 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC7.61□□□□□ -1.19
LIMD1Q9UGP4 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC7.61□□□□□ -1.19
LIMD1Q9UGP4 IGKV2-29-201ENST00000521304 372 ntBASIC7.61□□□□□ -1.19
LIMD1Q9UGP4 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms