Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 HMGB1P44-201ENST00000508597 572 ntBASIC7.88□□□□□ -1.15
TRIM47Q96LD4 RNA5SP441-201ENST00000516809 88 ntBASIC7.88□□□□□ -1.15
TRIM47Q96LD4 HMGB1P41-201ENST00000520234 440 ntBASIC7.88□□□□□ -1.15
TRIM47Q96LD4 IGKV3D-34-201ENST00000522638 302 ntBASIC7.88□□□□□ -1.15
TRIM47Q96LD4 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC7.88□□□□□ -1.15
TRIM47Q96LD4 COX6CP5-201ENST00000527162 228 ntBASIC7.88□□□□□ -1.15
TRIM47Q96LD4 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC7.88□□□□□ -1.15
TRIM47Q96LD4 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
TRIM47Q96LD4 DNAJC8P1-201ENST00000554535 372 ntBASIC7.88□□□□□ -1.15
TRIM47Q96LD4 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC7.88□□□□□ -1.15
TRIM47Q96LD4 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
TRIM47Q96LD4 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC7.88□□□□□ -1.15
TRIM47Q96LD4 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC7.88□□□□□ -1.15
TRIM47Q96LD4 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC7.88□□□□□ -1.15
TRIM47Q96LD4 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
TRIM47Q96LD4 TEX41-265ENST00000627785 704 ntTSL 5 BASIC7.88□□□□□ -1.15
TRIM47Q96LD4 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC7.88□□□□□ -1.15
TRIM47Q96LD4 MAPK10-365ENST00000641902 3825 ntBASIC7.88□□□□□ -1.15
TRIM47Q96LD4 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC7.88□□□□□ -1.15
TRIM47Q96LD4 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
TRIM47Q96LD4 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
TRIM47Q96LD4 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
TRIM47Q96LD4 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
TRIM47Q96LD4 TTC39DP-201ENST00000416781 1688 ntBASIC7.88□□□□□ -1.15
TRIM47Q96LD4 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
TRIM47Q96LD4 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
TRIM47Q96LD4 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
TRIM47Q96LD4 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
TRIM47Q96LD4 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 ZNF37BP-203ENST00000452306 1352 ntBASIC7.87□□□□□ -1.15
TRIM47Q96LD4 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 AL133243.4-201ENST00000623116 3109 ntBASIC7.87□□□□□ -1.15
TRIM47Q96LD4 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 Y_RNA.18-201ENST00000362461 102 ntBASIC7.87□□□□□ -1.15
TRIM47Q96LD4 snoZ40.1-201ENST00000364540 72 ntBASIC7.87□□□□□ -1.15
TRIM47Q96LD4 SNORA33.2-201ENST00000365413 134 ntBASIC7.87□□□□□ -1.15
TRIM47Q96LD4 SNORA4.3-201ENST00000365564 137 ntBASIC7.87□□□□□ -1.15
TRIM47Q96LD4 NOX1-203ENST00000372964 661 ntTSL 2 BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 MIR559-201ENST00000385188 96 ntBASIC7.87□□□□□ -1.15
TRIM47Q96LD4 UBBP1-201ENST00000392399 473 ntBASIC7.87□□□□□ -1.15
TRIM47Q96LD4 YWHAZP6-201ENST00000399764 738 ntBASIC7.87□□□□□ -1.15
TRIM47Q96LD4 RNA5SP198-201ENST00000410376 127 ntBASIC7.87□□□□□ -1.15
TRIM47Q96LD4 HMGB3P23-201ENST00000414981 585 ntBASIC7.87□□□□□ -1.15
TRIM47Q96LD4 RPS10P21-201ENST00000430654 475 ntBASIC7.87□□□□□ -1.15
TRIM47Q96LD4 IGLV3-4-201ENST00000432300 244 ntBASIC7.87□□□□□ -1.15
TRIM47Q96LD4 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 ARL2BPP10-201ENST00000446487 531 ntBASIC7.87□□□□□ -1.15
TRIM47Q96LD4 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 BUD31P2-201ENST00000449374 300 ntBASIC7.87□□□□□ -1.15
TRIM47Q96LD4 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 AL034399.1-201ENST00000451535 380 ntBASIC7.87□□□□□ -1.15
TRIM47Q96LD4 DDX39BP2-208ENST00000453923 258 ntBASIC7.87□□□□□ -1.15
TRIM47Q96LD4 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 HMGB1P3-201ENST00000502802 616 ntBASIC7.87□□□□□ -1.15
TRIM47Q96LD4 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 AC008629.2-201ENST00000503783 483 ntBASIC7.87□□□□□ -1.15
TRIM47Q96LD4 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 RN7SKP13-201ENST00000515933 244 ntBASIC7.87□□□□□ -1.15
TRIM47Q96LD4 IGHV3-32-201ENST00000519182 355 ntBASIC7.87□□□□□ -1.15
TRIM47Q96LD4 MTCO3P15-201ENST00000526563 574 ntBASIC7.87□□□□□ -1.15
TRIM47Q96LD4 ELOCP31-201ENST00000540463 467 ntBASIC7.87□□□□□ -1.15
TRIM47Q96LD4 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 AC023827.2-201ENST00000566880 1061 ntBASIC7.87□□□□□ -1.15
TRIM47Q96LD4 AL078601.3-201ENST00000573303 535 ntBASIC7.87□□□□□ -1.15
TRIM47Q96LD4 MIR4502-201ENST00000580432 81 ntBASIC7.87□□□□□ -1.15
TRIM47Q96LD4 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 AL021368.3-201ENST00000607119 578 ntBASIC7.87□□□□□ -1.15
TRIM47Q96LD4 AL133215.3-201ENST00000609801 448 ntBASIC7.87□□□□□ -1.15
TRIM47Q96LD4 AL136295.6-201ENST00000610486 658 ntBASIC7.87□□□□□ -1.15
TRIM47Q96LD4 AL136097.3-201ENST00000611097 505 ntBASIC7.87□□□□□ -1.15
TRIM47Q96LD4 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 MFSD8-245ENST00000641743 948 ntBASIC7.87□□□□□ -1.15
TRIM47Q96LD4 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 AC005839.1-201ENST00000624148 3213 ntBASIC7.87□□□□□ -1.15
TRIM47Q96LD4 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM47Q96LD4 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms