Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC7.95□□□□□ -1.14
LRCH3Q96II8 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
LRCH3Q96II8 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
LRCH3Q96II8 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LRCH3Q96II8 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LRCH3Q96II8 RIOK2-201ENST00000283109 3922 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LRCH3Q96II8 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
LRCH3Q96II8 ZKSCAN8-202ENST00000457389 2071 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LRCH3Q96II8 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
LRCH3Q96II8 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
LRCH3Q96II8 KIDINS220-202ENST00000319688 3765 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
LRCH3Q96II8 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LRCH3Q96II8 RNA5SP238-201ENST00000365464 120 ntBASIC7.95□□□□□ -1.14
LRCH3Q96II8 RNA5SP279-201ENST00000365513 117 ntBASIC7.95□□□□□ -1.14
LRCH3Q96II8 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LRCH3Q96II8 SUGT1P1-201ENST00000379514 476 ntBASIC7.95□□□□□ -1.14
LRCH3Q96II8 Y_RNA.556-201ENST00000384677 113 ntBASIC7.95□□□□□ -1.14
LRCH3Q96II8 CD3D-202ENST00000392884 476 ntTSL 2 BASIC7.95□□□□□ -1.14
LRCH3Q96II8 AL583835.1-201ENST00000399570 407 ntBASIC7.95□□□□□ -1.14
LRCH3Q96II8 CHEK2P3-201ENST00000416118 248 ntBASIC7.95□□□□□ -1.14
LRCH3Q96II8 Z83313.1-201ENST00000433780 718 ntBASIC7.95□□□□□ -1.14
LRCH3Q96II8 LSM1P1-201ENST00000438629 273 ntBASIC7.95□□□□□ -1.14
LRCH3Q96II8 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC7.95□□□□□ -1.14
LRCH3Q96II8 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC7.95□□□□□ -1.14
LRCH3Q96II8 SETP20-201ENST00000457046 852 ntBASIC7.95□□□□□ -1.14
LRCH3Q96II8 AC094085.1-201ENST00000468914 584 ntBASIC7.95□□□□□ -1.14
LRCH3Q96II8 AC017015.1-201ENST00000477387 286 ntBASIC7.95□□□□□ -1.14
LRCH3Q96II8 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC7.95□□□□□ -1.14
LRCH3Q96II8 AC124945.1-201ENST00000485133 188 ntBASIC7.95□□□□□ -1.14
LRCH3Q96II8 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
LRCH3Q96II8 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
LRCH3Q96II8 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC7.95□□□□□ -1.14
LRCH3Q96II8 AC108043.1-201ENST00000512696 574 ntBASIC7.95□□□□□ -1.14
LRCH3Q96II8 RNU6-635P-201ENST00000516651 102 ntBASIC7.95□□□□□ -1.14
LRCH3Q96II8 RNU6-1261P-201ENST00000517194 104 ntBASIC7.95□□□□□ -1.14
LRCH3Q96II8 AC006512.2-201ENST00000543250 486 ntBASIC7.95□□□□□ -1.14
LRCH3Q96II8 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.95□□□□□ -1.14
LRCH3Q96II8 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC7.95□□□□□ -1.14
LRCH3Q96II8 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC7.95□□□□□ -1.14
LRCH3Q96II8 PPIAP14-201ENST00000577627 496 ntBASIC7.95□□□□□ -1.14
LRCH3Q96II8 AC053481.3-201ENST00000577881 843 ntBASIC7.95□□□□□ -1.14
LRCH3Q96II8 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC7.95□□□□□ -1.14
LRCH3Q96II8 BCRP9-201ENST00000605312 388 ntBASIC7.95□□□□□ -1.14
LRCH3Q96II8 AC124319.3-201ENST00000616832 526 ntBASIC7.95□□□□□ -1.14
LRCH3Q96II8 AC008626.2-201ENST00000624425 248 ntBASIC7.95□□□□□ -1.14
LRCH3Q96II8 AC051619.3-201ENST00000560646 2426 ntBASIC7.95□□□□□ -1.14
LRCH3Q96II8 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
LRCH3Q96II8 GCSAM-201ENST00000308910 3336 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
LRCH3Q96II8 AFF1-211ENST00000544085 3644 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
LRCH3Q96II8 PTPN3-201ENST00000262539 6832 ntTSL 5 BASIC7.95□□□□□ -1.14
LRCH3Q96II8 ADA2-204ENST00000399839 3986 ntAPPRIS P3 TSL 5 BASIC7.95□□□□□ -1.14
LRCH3Q96II8 LY75-CD302-202ENST00000505052 5482 ntAPPRIS ALT2 TSL 2 BASIC7.95□□□□□ -1.14
LRCH3Q96II8 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
LRCH3Q96II8 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
LRCH3Q96II8 GC-201ENST00000273951 1972 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LRCH3Q96II8 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC7.95□□□□□ -1.14
LRCH3Q96II8 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC7.95□□□□□ -1.14
LRCH3Q96II8 OR8D4-202ENST00000641687 2904 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
LRCH3Q96II8 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
LRCH3Q96II8 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LRCH3Q96II8 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LRCH3Q96II8 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LRCH3Q96II8 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LRCH3Q96II8 ZNF807-201ENST00000328088 1707 ntBASIC7.95□□□□□ -1.14
LRCH3Q96II8 ODF2-220ENST00000604420 3030 ntTSL 2 BASIC7.95□□□□□ -1.14
LRCH3Q96II8 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LRCH3Q96II8 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC7.94□□□□□ -1.14
LRCH3Q96II8 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.94□□□□□ -1.14
LRCH3Q96II8 ENO1P4-201ENST00000416471 1785 ntBASIC7.94□□□□□ -1.14
LRCH3Q96II8 MAGT1-205ENST00000618282 2788 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LRCH3Q96II8 AC104447.1-201ENST00000624214 2124 ntBASIC7.94□□□□□ -1.14
LRCH3Q96II8 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
LRCH3Q96II8 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
LRCH3Q96II8 TBC1D5-209ENST00000429383 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LRCH3Q96II8 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC7.94□□□□□ -1.14
LRCH3Q96II8 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LRCH3Q96II8 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LRCH3Q96II8 AC079777.1-201ENST00000623836 1953 ntBASIC7.94□□□□□ -1.14
LRCH3Q96II8 RNA5SP152-201ENST00000365184 110 ntBASIC7.94□□□□□ -1.14
LRCH3Q96II8 MDM4-202ENST00000367180 547 ntTSL 3 BASIC7.94□□□□□ -1.14
LRCH3Q96II8 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
LRCH3Q96II8 AC026310.1-201ENST00000396004 378 ntBASIC7.94□□□□□ -1.14
LRCH3Q96II8 SMARCE1P6-201ENST00000398372 1216 ntBASIC7.94□□□□□ -1.14
LRCH3Q96II8 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC7.94□□□□□ -1.14
LRCH3Q96II8 SNORA11C-201ENST00000408532 129 ntBASIC7.94□□□□□ -1.14
LRCH3Q96II8 Y_RNA.615-201ENST00000410769 117 ntBASIC7.94□□□□□ -1.14
LRCH3Q96II8 AL450992.3-201ENST00000413192 568 ntBASIC7.94□□□□□ -1.14
LRCH3Q96II8 AC009413.1-201ENST00000414823 399 ntBASIC7.94□□□□□ -1.14
LRCH3Q96II8 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC7.94□□□□□ -1.14
LRCH3Q96II8 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC7.94□□□□□ -1.14
LRCH3Q96II8 AC023347.2-201ENST00000433994 462 ntBASIC7.94□□□□□ -1.14
LRCH3Q96II8 PRPF38AP2-201ENST00000438179 851 ntBASIC7.94□□□□□ -1.14
LRCH3Q96II8 AC009518.3-201ENST00000438972 253 ntBASIC7.94□□□□□ -1.14
LRCH3Q96II8 AL391987.1-201ENST00000441025 200 ntBASIC7.94□□□□□ -1.14
LRCH3Q96II8 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC7.94□□□□□ -1.14
LRCH3Q96II8 RPL7P51-201ENST00000490532 749 ntBASIC7.94□□□□□ -1.14
LRCH3Q96II8 AC106872.3-201ENST00000495104 446 ntBASIC7.94□□□□□ -1.14
LRCH3Q96II8 VN1R104P-201ENST00000505115 1009 ntBASIC7.94□□□□□ -1.14
LRCH3Q96II8 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC7.94□□□□□ -1.14
LRCH3Q96II8 AC068134.3-201ENST00000513620 788 ntBASIC7.94□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms