Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.22□□□□□ -1.57
RTP4Q96DX8 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.22□□□□□ -1.57
RTP4Q96DX8 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RTP4Q96DX8 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
RTP4Q96DX8 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RTP4Q96DX8 RPL12P3-201ENST00000440080 396 ntBASIC5.22□□□□□ -1.57
RTP4Q96DX8 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.22□□□□□ -1.57
RTP4Q96DX8 AC004980.3-201ENST00000447046 365 ntBASIC5.22□□□□□ -1.57
RTP4Q96DX8 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC5.22□□□□□ -1.57
RTP4Q96DX8 AC108729.2-201ENST00000476543 840 ntBASIC5.22□□□□□ -1.57
RTP4Q96DX8 AC069304.1-201ENST00000491593 704 ntBASIC5.22□□□□□ -1.57
RTP4Q96DX8 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.22□□□□□ -1.57
RTP4Q96DX8 AC117525.1-201ENST00000515228 503 ntBASIC5.22□□□□□ -1.57
RTP4Q96DX8 VTA1P2-201ENST00000520205 911 ntBASIC5.22□□□□□ -1.57
RTP4Q96DX8 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.22□□□□□ -1.57
RTP4Q96DX8 AC024940.3-201ENST00000538551 316 ntBASIC5.22□□□□□ -1.57
RTP4Q96DX8 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.22□□□□□ -1.57
RTP4Q96DX8 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.22□□□□□ -1.57
RTP4Q96DX8 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.22□□□□□ -1.57
RTP4Q96DX8 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.22□□□□□ -1.57
RTP4Q96DX8 AC009852.2-201ENST00000567898 485 ntBASIC5.22□□□□□ -1.57
RTP4Q96DX8 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.22□□□□□ -1.57
RTP4Q96DX8 AC090510.2-201ENST00000617465 629 ntBASIC5.22□□□□□ -1.57
RTP4Q96DX8 AC015914.2-201ENST00000618167 288 ntBASIC5.22□□□□□ -1.57
RTP4Q96DX8 AC095038.2-201ENST00000621464 1070 ntBASIC5.22□□□□□ -1.57
RTP4Q96DX8 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.22□□□□□ -1.57
RTP4Q96DX8 AC099654.8-201ENST00000637757 681 ntBASIC5.22□□□□□ -1.57
RTP4Q96DX8 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RTP4Q96DX8 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
RTP4Q96DX8 AC110792.3-201ENST00000595906 1614 ntBASIC5.22□□□□□ -1.57
RTP4Q96DX8 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RTP4Q96DX8 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RTP4Q96DX8 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.22□□□□□ -1.57
RTP4Q96DX8 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.22□□□□□ -1.57
RTP4Q96DX8 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.22□□□□□ -1.57
RTP4Q96DX8 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RTP4Q96DX8 AL078595.2-201ENST00000605309 1780 ntBASIC5.21□□□□□ -1.57
RTP4Q96DX8 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
RTP4Q96DX8 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
RTP4Q96DX8 AL132656.3-201ENST00000606384 1595 ntBASIC5.21□□□□□ -1.57
RTP4Q96DX8 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
RTP4Q96DX8 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
RTP4Q96DX8 AC120036.2-201ENST00000509729 1474 ntBASIC5.21□□□□□ -1.58
RTP4Q96DX8 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RTP4Q96DX8 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.21□□□□□ -1.58
RTP4Q96DX8 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.21□□□□□ -1.58
RTP4Q96DX8 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.21□□□□□ -1.58
RTP4Q96DX8 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RTP4Q96DX8 RN7SKP113-201ENST00000363891 295 ntBASIC5.21□□□□□ -1.58
RTP4Q96DX8 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RTP4Q96DX8 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RTP4Q96DX8 RN7SKP125-201ENST00000410481 302 ntBASIC5.21□□□□□ -1.58
RTP4Q96DX8 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.21□□□□□ -1.58
RTP4Q96DX8 UBE2D3P3-201ENST00000426992 425 ntBASIC5.21□□□□□ -1.58
RTP4Q96DX8 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.21□□□□□ -1.58
RTP4Q96DX8 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.21□□□□□ -1.58
RTP4Q96DX8 RPS29P9-201ENST00000440360 171 ntBASIC5.21□□□□□ -1.58
RTP4Q96DX8 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.21□□□□□ -1.58
RTP4Q96DX8 RPS17P2-201ENST00000461663 408 ntBASIC5.21□□□□□ -1.58
RTP4Q96DX8 AC091180.1-201ENST00000462104 372 ntBASIC5.21□□□□□ -1.58
RTP4Q96DX8 RPS18P6-201ENST00000476880 458 ntBASIC5.21□□□□□ -1.58
RTP4Q96DX8 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.21□□□□□ -1.58
RTP4Q96DX8 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.21□□□□□ -1.58
RTP4Q96DX8 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.21□□□□□ -1.58
RTP4Q96DX8 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.21□□□□□ -1.58
RTP4Q96DX8 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.21□□□□□ -1.58
RTP4Q96DX8 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.21□□□□□ -1.58
RTP4Q96DX8 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.21□□□□□ -1.58
RTP4Q96DX8 MIR3691-201ENST00000578066 90 ntBASIC5.21□□□□□ -1.58
RTP4Q96DX8 AC135178.6-201ENST00000605314 398 ntBASIC5.21□□□□□ -1.58
RTP4Q96DX8 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RTP4Q96DX8 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.21□□□□□ -1.58
RTP4Q96DX8 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.21□□□□□ -1.58
RTP4Q96DX8 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RTP4Q96DX8 AL590410.1-201ENST00000617925 333 ntBASIC5.21□□□□□ -1.58
RTP4Q96DX8 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.21□□□□□ -1.58
RTP4Q96DX8 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.21□□□□□ -1.58
RTP4Q96DX8 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.21□□□□□ -1.58
RTP4Q96DX8 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.21□□□□□ -1.58
RTP4Q96DX8 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.21□□□□□ -1.58
RTP4Q96DX8 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
RTP4Q96DX8 AC011493.1-201ENST00000596753 1632 ntBASIC5.21□□□□□ -1.58
RTP4Q96DX8 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
RTP4Q96DX8 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RTP4Q96DX8 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RTP4Q96DX8 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
RTP4Q96DX8 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
RTP4Q96DX8 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
RTP4Q96DX8 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RTP4Q96DX8 AL731532.2-201ENST00000623542 1953 ntBASIC5.2□□□□□ -1.58
RTP4Q96DX8 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
RTP4Q96DX8 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RTP4Q96DX8 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RTP4Q96DX8 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
RTP4Q96DX8 THAP12P5-201ENST00000405864 2275 ntBASIC5.2□□□□□ -1.58
RTP4Q96DX8 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.2□□□□□ -1.58
RTP4Q96DX8 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
RTP4Q96DX8 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RTP4Q96DX8 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.2□□□□□ -1.58
RTP4Q96DX8 RN7SKP186-201ENST00000365371 303 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms