Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC8.18□□□□□ -1.1
RC3H1Q5TC82 OR10AB1P-202ENST00000641219 1686 ntBASIC8.18□□□□□ -1.1
RC3H1Q5TC82 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
RC3H1Q5TC82 RNA5SP477-201ENST00000362639 119 ntBASIC8.17□□□□□ -1.1
RC3H1Q5TC82 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC8.17□□□□□ -1.1
RC3H1Q5TC82 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
RC3H1Q5TC82 RNU6-780P-201ENST00000391030 104 ntBASIC8.17□□□□□ -1.1
RC3H1Q5TC82 AC087752.1-201ENST00000391360 558 ntBASIC8.17□□□□□ -1.1
RC3H1Q5TC82 GSTA12P-201ENST00000402398 508 ntBASIC8.17□□□□□ -1.1
RC3H1Q5TC82 AL589994.1-201ENST00000404962 340 ntBASIC8.17□□□□□ -1.1
RC3H1Q5TC82 MIR1204-201ENST00000408388 67 ntBASIC8.17□□□□□ -1.1
RC3H1Q5TC82 RNU4ATAC2P-201ENST00000408674 126 ntBASIC8.17□□□□□ -1.1
RC3H1Q5TC82 AL356968.2-201ENST00000412769 1257 ntBASIC8.17□□□□□ -1.1
RC3H1Q5TC82 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC8.17□□□□□ -1.1
RC3H1Q5TC82 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC8.17□□□□□ -1.1
RC3H1Q5TC82 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
RC3H1Q5TC82 RPS7P8-201ENST00000418311 581 ntBASIC8.17□□□□□ -1.1
RC3H1Q5TC82 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC8.17□□□□□ -1.1
RC3H1Q5TC82 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
RC3H1Q5TC82 AL157884.1-201ENST00000424561 454 ntBASIC8.17□□□□□ -1.1
RC3H1Q5TC82 AC003989.1-201ENST00000434569 565 ntBASIC8.17□□□□□ -1.1
RC3H1Q5TC82 AL353662.1-201ENST00000439099 327 ntBASIC8.17□□□□□ -1.1
RC3H1Q5TC82 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC8.17□□□□□ -1.1
RC3H1Q5TC82 IPO7P1-201ENST00000442031 636 ntBASIC8.17□□□□□ -1.1
RC3H1Q5TC82 RPL7P31-201ENST00000450192 724 ntBASIC8.17□□□□□ -1.1
RC3H1Q5TC82 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC8.17□□□□□ -1.1
RC3H1Q5TC82 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC8.17□□□□□ -1.1
RC3H1Q5TC82 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC8.17□□□□□ -1.1
RC3H1Q5TC82 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC8.17□□□□□ -1.1
RC3H1Q5TC82 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC8.17□□□□□ -1.1
RC3H1Q5TC82 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
RC3H1Q5TC82 AC093027.1-201ENST00000546698 429 ntBASIC8.17□□□□□ -1.1
RC3H1Q5TC82 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC8.17□□□□□ -1.1
RC3H1Q5TC82 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC8.17□□□□□ -1.1
RC3H1Q5TC82 HMGB1P33-201ENST00000563485 527 ntBASIC8.17□□□□□ -1.1
RC3H1Q5TC82 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC8.17□□□□□ -1.1
RC3H1Q5TC82 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC8.17□□□□□ -1.1
RC3H1Q5TC82 AC034268.2-201ENST00000571784 482 ntBASIC8.17□□□□□ -1.1
RC3H1Q5TC82 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC8.17□□□□□ -1.1
RC3H1Q5TC82 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC8.17□□□□□ -1.1
RC3H1Q5TC82 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC8.17□□□□□ -1.1
RC3H1Q5TC82 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC8.17□□□□□ -1.1
RC3H1Q5TC82 AC073091.2-201ENST00000603205 907 ntBASIC8.17□□□□□ -1.1
RC3H1Q5TC82 AC233280.2-201ENST00000603917 1070 ntBASIC8.17□□□□□ -1.1
RC3H1Q5TC82 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC8.17□□□□□ -1.1
RC3H1Q5TC82 OR8G7P-201ENST00000616658 848 ntBASIC8.17□□□□□ -1.1
RC3H1Q5TC82 AL121890.2-201ENST00000617644 465 ntBASIC8.17□□□□□ -1.1
RC3H1Q5TC82 AC079097.1-201ENST00000512187 1399 ntBASIC8.17□□□□□ -1.1
RC3H1Q5TC82 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
RC3H1Q5TC82 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC8.17□□□□□ -1.1
RC3H1Q5TC82 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
RC3H1Q5TC82 ZNF736P3Y-201ENST00000428264 1465 ntBASIC8.17□□□□□ -1.1
RC3H1Q5TC82 SAGE3P-201ENST00000619800 1635 ntBASIC8.17□□□□□ -1.1
RC3H1Q5TC82 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
RC3H1Q5TC82 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
RC3H1Q5TC82 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
RC3H1Q5TC82 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
RC3H1Q5TC82 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC8.17□□□□□ -1.1
RC3H1Q5TC82 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
RC3H1Q5TC82 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
RC3H1Q5TC82 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 OR4K15-201ENST00000305051 1216 ntBASIC8.16□□□□□ -1.1
RC3H1Q5TC82 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 Y_RNA.138-201ENST00000363462 102 ntBASIC8.16□□□□□ -1.1
RC3H1Q5TC82 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 AL096800.1-201ENST00000405326 893 ntBASIC8.16□□□□□ -1.1
RC3H1Q5TC82 RN7SKP144-201ENST00000411108 279 ntBASIC8.16□□□□□ -1.1
RC3H1Q5TC82 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 CYCSP52-201ENST00000422857 310 ntBASIC8.16□□□□□ -1.1
RC3H1Q5TC82 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 MTCO1P20-201ENST00000425366 358 ntBASIC8.16□□□□□ -1.1
RC3H1Q5TC82 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 LYPLA1P1-201ENST00000434514 622 ntBASIC8.16□□□□□ -1.1
RC3H1Q5TC82 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 RPL7AP52-201ENST00000458096 790 ntBASIC8.16□□□□□ -1.1
RC3H1Q5TC82 AC098847.1-201ENST00000473094 348 ntBASIC8.16□□□□□ -1.1
RC3H1Q5TC82 RN7SL326P-201ENST00000477493 296 ntBASIC8.16□□□□□ -1.1
RC3H1Q5TC82 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 AC110792.2-201ENST00000510278 224 ntBASIC8.16□□□□□ -1.1
RC3H1Q5TC82 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 MINCR-206ENST00000524335 499 ntTSL 2 BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RC3H1Q5TC82 AL157687.1-201ENST00000554853 619 ntBASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 143.9 ms