Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RSPO4Q2I0M5 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC6.59□□□□□ -1.35
RSPO4Q2I0M5 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RSPO4Q2I0M5 SHQ1P1-201ENST00000437111 1544 ntBASIC6.59□□□□□ -1.35
RSPO4Q2I0M5 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.59□□□□□ -1.35
RSPO4Q2I0M5 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC6.59□□□□□ -1.35
RSPO4Q2I0M5 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RSPO4Q2I0M5 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RSPO4Q2I0M5 AC125603.4-201ENST00000621942 2699 ntBASIC6.59□□□□□ -1.35
RSPO4Q2I0M5 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
RSPO4Q2I0M5 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RSPO4Q2I0M5 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC6.59□□□□□ -1.36
RSPO4Q2I0M5 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.59□□□□□ -1.36
RSPO4Q2I0M5 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC6.59□□□□□ -1.36
RSPO4Q2I0M5 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
RSPO4Q2I0M5 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC6.59□□□□□ -1.36
RSPO4Q2I0M5 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
RSPO4Q2I0M5 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.59□□□□□ -1.36
RSPO4Q2I0M5 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 SPATA31C2-201ENST00000324915 3777 ntBASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 TATDN2P3-201ENST00000452855 3665 ntBASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 FTO-222ENST00000637969 2889 ntTSL 5 BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 RNU6-1017P-201ENST00000363613 106 ntBASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 RN7SKP174-201ENST00000363803 330 ntBASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 SNORA74A-201ENST00000364089 198 ntBASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 RNU6-374P-201ENST00000364146 108 ntBASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 PPIAP26-201ENST00000377951 522 ntBASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 Y_RNA.474-201ENST00000384341 102 ntBASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 AC093719.1-202ENST00000392735 373 ntBASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 Y_RNA.625-201ENST00000411256 107 ntBASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 PIGPP2-201ENST00000411569 458 ntBASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 USP9YP13-201ENST00000417797 480 ntBASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 AC007563.3-201ENST00000433233 371 ntBASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 SNRPEP4-201ENST00000435815 279 ntBASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 EMC3-AS1-205ENST00000438698 534 ntBASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 RPL23AP28-201ENST00000448062 470 ntBASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 PTMAP1-205ENST00000455552 325 ntBASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 RPL30P9-201ENST00000465586 330 ntBASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 AC096741.1-201ENST00000472250 846 ntBASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 RN7SL717P-201ENST00000478343 297 ntBASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 AL163540.1-201ENST00000485382 386 ntBASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 AC091849.1-201ENST00000509920 121 ntBASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 AC060775.1-201ENST00000518241 520 ntBASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 OSBPL9P2-201ENST00000526582 1228 ntBASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 AL512310.1-201ENST00000548639 172 ntBASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 AC026956.1-201ENST00000558741 396 ntBASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 MIR3176-201ENST00000582210 90 ntBASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 AC007255.2-201ENST00000604053 631 ntBASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 AC129778.1-202ENST00000623812 261 ntBASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 AL591379.1-207ENST00000635982 261 ntBASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
RSPO4Q2I0M5 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RSPO4Q2I0M5 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
RSPO4Q2I0M5 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.57□□□□□ -1.36
RSPO4Q2I0M5 AKAP17BP-201ENST00000431706 2719 ntBASIC6.57□□□□□ -1.36
RSPO4Q2I0M5 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RSPO4Q2I0M5 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RSPO4Q2I0M5 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RSPO4Q2I0M5 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC6.57□□□□□ -1.36
RSPO4Q2I0M5 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms