Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.18□□□□□ -1.74
CLDN12P56749 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
CLDN12P56749 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN12P56749 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN12P56749 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN12P56749 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CLDN12P56749 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.18□□□□□ -1.74
CLDN12P56749 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN12P56749 MAPK10-320ENST00000641462 6696 ntBASIC4.18□□□□□ -1.74
CLDN12P56749 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.18□□□□□ -1.74
CLDN12P56749 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
CLDN12P56749 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN12P56749 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN12P56749 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN12P56749 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.18□□□□□ -1.74
CLDN12P56749 TMSB4XP4-201ENST00000323496 618 ntBASIC4.18□□□□□ -1.74
CLDN12P56749 IL6STP1-201ENST00000346911 1020 ntBASIC4.18□□□□□ -1.74
CLDN12P56749 RNU1-94P-201ENST00000362627 173 ntBASIC4.18□□□□□ -1.74
CLDN12P56749 RNU1-43P-201ENST00000365052 165 ntBASIC4.18□□□□□ -1.74
CLDN12P56749 MIR195-201ENST00000385194 87 ntBASIC4.18□□□□□ -1.74
CLDN12P56749 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.18□□□□□ -1.74
CLDN12P56749 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CLDN12P56749 RN7SKP126-201ENST00000411143 300 ntBASIC4.18□□□□□ -1.74
CLDN12P56749 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.18□□□□□ -1.74
CLDN12P56749 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.18□□□□□ -1.74
CLDN12P56749 TBCAP2-201ENST00000416175 326 ntBASIC4.18□□□□□ -1.74
CLDN12P56749 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC4.18□□□□□ -1.74
CLDN12P56749 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.18□□□□□ -1.74
CLDN12P56749 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.18□□□□□ -1.74
CLDN12P56749 AP000936.3-201ENST00000438127 255 ntBASIC4.18□□□□□ -1.74
CLDN12P56749 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.18□□□□□ -1.74
CLDN12P56749 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.18□□□□□ -1.74
CLDN12P56749 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.18□□□□□ -1.74
CLDN12P56749 RN7SL649P-201ENST00000496974 275 ntBASIC4.18□□□□□ -1.74
CLDN12P56749 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.18□□□□□ -1.74
CLDN12P56749 AC021146.3-201ENST00000511911 260 ntBASIC4.18□□□□□ -1.74
CLDN12P56749 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.18□□□□□ -1.74
CLDN12P56749 RNA5SP228-201ENST00000516232 133 ntBASIC4.18□□□□□ -1.74
CLDN12P56749 snoU109.6-201ENST00000516831 118 ntBASIC4.18□□□□□ -1.74
CLDN12P56749 Y_RNA.719-201ENST00000517156 106 ntBASIC4.18□□□□□ -1.74
CLDN12P56749 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC4.18□□□□□ -1.74
CLDN12P56749 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.18□□□□□ -1.74
CLDN12P56749 SNORA74C-1-201ENST00000580726 201 ntBASIC4.18□□□□□ -1.74
CLDN12P56749 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.18□□□□□ -1.74
CLDN12P56749 VN1R81P-201ENST00000602085 372 ntBASIC4.18□□□□□ -1.74
CLDN12P56749 AL161912.3-201ENST00000605404 628 ntBASIC4.18□□□□□ -1.74
CLDN12P56749 AC026979.4-201ENST00000606555 645 ntBASIC4.18□□□□□ -1.74
CLDN12P56749 AC023813.4-201ENST00000607580 580 ntBASIC4.18□□□□□ -1.74
CLDN12P56749 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN12P56749 AL022401.1-201ENST00000619498 108 ntBASIC4.18□□□□□ -1.74
CLDN12P56749 AP003072.5-201ENST00000623872 773 ntBASIC4.18□□□□□ -1.74
CLDN12P56749 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CLDN12P56749 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.18□□□□□ -1.74
CLDN12P56749 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.18□□□□□ -1.74
CLDN12P56749 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN12P56749 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN12P56749 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN12P56749 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
CLDN12P56749 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.18□□□□□ -1.74
CLDN12P56749 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN12P56749 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CLDN12P56749 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CLDN12P56749 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CLDN12P56749 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
CLDN12P56749 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.17□□□□□ -1.74
CLDN12P56749 U3.2-201ENST00000362981 210 ntBASIC4.17□□□□□ -1.74
CLDN12P56749 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.17□□□□□ -1.74
CLDN12P56749 VN1R12P-201ENST00000403778 876 ntBASIC4.17□□□□□ -1.74
CLDN12P56749 AL136116.2-201ENST00000404020 785 ntBASIC4.17□□□□□ -1.74
CLDN12P56749 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.17□□□□□ -1.74
CLDN12P56749 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.17□□□□□ -1.74
CLDN12P56749 MTND6P18-201ENST00000439477 513 ntBASIC4.17□□□□□ -1.74
CLDN12P56749 AC007386.1-201ENST00000455212 582 ntBASIC4.17□□□□□ -1.74
CLDN12P56749 EIF2S2P5-201ENST00000457635 968 ntBASIC4.17□□□□□ -1.74
CLDN12P56749 RPL7AP28-201ENST00000464513 571 ntBASIC4.17□□□□□ -1.74
CLDN12P56749 AC094085.1-201ENST00000468914 584 ntBASIC4.17□□□□□ -1.74
CLDN12P56749 RN7SL741P-201ENST00000482473 289 ntBASIC4.17□□□□□ -1.74
CLDN12P56749 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CLDN12P56749 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.17□□□□□ -1.74
CLDN12P56749 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.17□□□□□ -1.74
CLDN12P56749 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.17□□□□□ -1.74
CLDN12P56749 OR4A46P-201ENST00000527255 933 ntBASIC4.17□□□□□ -1.74
CLDN12P56749 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CLDN12P56749 GSTP1P1-201ENST00000548078 319 ntBASIC4.17□□□□□ -1.74
CLDN12P56749 AL049839.1-201ENST00000556151 657 ntBASIC4.17□□□□□ -1.74
CLDN12P56749 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.17□□□□□ -1.74
CLDN12P56749 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.17□□□□□ -1.74
CLDN12P56749 MIR4271-201ENST00000582451 67 ntBASIC4.17□□□□□ -1.74
CLDN12P56749 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.17□□□□□ -1.74
CLDN12P56749 AC005726.4-201ENST00000582858 458 ntBASIC4.17□□□□□ -1.74
CLDN12P56749 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.17□□□□□ -1.74
CLDN12P56749 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.17□□□□□ -1.74
CLDN12P56749 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.17□□□□□ -1.74
CLDN12P56749 AC130352.1-201ENST00000602979 661 ntBASIC4.17□□□□□ -1.74
CLDN12P56749 AC243960.7-201ENST00000623532 707 ntBASIC4.17□□□□□ -1.74
CLDN12P56749 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.17□□□□□ -1.74
CLDN12P56749 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.17□□□□□ -1.74
CLDN12P56749 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CLDN12P56749 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.17□□□□□ -1.74
CLDN12P56749 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms