Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HCFC1P51610 AL132640.2-201ENST00000559968 1698 ntBASIC4.4□□□□□ -1.71
HCFC1P51610 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HCFC1P51610 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
HCFC1P51610 ZNF652P1-201ENST00000442420 1309 ntBASIC4.4□□□□□ -1.71
HCFC1P51610 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HCFC1P51610 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HCFC1P51610 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HCFC1P51610 THAP12P8-201ENST00000447914 2115 ntBASIC4.4□□□□□ -1.71
HCFC1P51610 MAPK10-304ENST00000641341 3984 ntBASIC4.4□□□□□ -1.71
HCFC1P51610 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.4□□□□□ -1.71
HCFC1P51610 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
HCFC1P51610 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HCFC1P51610 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HCFC1P51610 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HCFC1P51610 AC022893.2-201ENST00000564832 3296 ntBASIC4.4□□□□□ -1.71
HCFC1P51610 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC4.39□□□□□ -1.71
HCFC1P51610 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
HCFC1P51610 SNORA2.3-201ENST00000383920 135 ntBASIC4.39□□□□□ -1.71
HCFC1P51610 U3.30-201ENST00000391308 210 ntBASIC4.39□□□□□ -1.71
HCFC1P51610 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.39□□□□□ -1.71
HCFC1P51610 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.39□□□□□ -1.71
HCFC1P51610 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC4.39□□□□□ -1.71
HCFC1P51610 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.39□□□□□ -1.71
HCFC1P51610 RPL36AP15-201ENST00000444514 266 ntBASIC4.39□□□□□ -1.71
HCFC1P51610 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.39□□□□□ -1.71
HCFC1P51610 SLC25A18P1-201ENST00000449385 454 ntBASIC4.39□□□□□ -1.71
HCFC1P51610 C1DP3-201ENST00000455013 423 ntBASIC4.39□□□□□ -1.71
HCFC1P51610 PSAT1P4-201ENST00000466500 526 ntBASIC4.39□□□□□ -1.71
HCFC1P51610 AC012123.2-201ENST00000485809 248 ntBASIC4.39□□□□□ -1.71
HCFC1P51610 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.39□□□□□ -1.71
HCFC1P51610 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.39□□□□□ -1.71
HCFC1P51610 AC097173.1-201ENST00000505862 819 ntBASIC4.39□□□□□ -1.71
HCFC1P51610 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.39□□□□□ -1.71
HCFC1P51610 RN7SKP276-201ENST00000516242 268 ntBASIC4.39□□□□□ -1.71
HCFC1P51610 RN7SKP5-201ENST00000517045 272 ntBASIC4.39□□□□□ -1.71
HCFC1P51610 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.39□□□□□ -1.71
HCFC1P51610 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.39□□□□□ -1.71
HCFC1P51610 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HCFC1P51610 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.39□□□□□ -1.71
HCFC1P51610 PRPF19P1-201ENST00000584766 898 ntBASIC4.39□□□□□ -1.71
HCFC1P51610 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.39□□□□□ -1.71
HCFC1P51610 AC098483.2-201ENST00000603158 454 ntBASIC4.39□□□□□ -1.71
HCFC1P51610 AL161616.1-201ENST00000611867 286 ntBASIC4.39□□□□□ -1.71
HCFC1P51610 AC009032.1-201ENST00000617574 431 ntBASIC4.39□□□□□ -1.71
HCFC1P51610 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HCFC1P51610 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
HCFC1P51610 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HCFC1P51610 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HCFC1P51610 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HCFC1P51610 CASC19-255ENST00000641733 1385 ntBASIC4.39□□□□□ -1.71
HCFC1P51610 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
HCFC1P51610 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.39□□□□□ -1.71
HCFC1P51610 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.39□□□□□ -1.71
HCFC1P51610 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HCFC1P51610 RNA5SP345-201ENST00000410646 108 ntBASIC4.39□□□□□ -1.71
HCFC1P51610 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.39□□□□□ -1.71
HCFC1P51610 AC013410.2-201ENST00000422627 201 ntBASIC4.39□□□□□ -1.71
HCFC1P51610 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.39□□□□□ -1.71
HCFC1P51610 RPL17P35-201ENST00000432217 549 ntBASIC4.39□□□□□ -1.71
HCFC1P51610 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.39□□□□□ -1.71
HCFC1P51610 AL359265.1-201ENST00000440296 795 ntBASIC4.39□□□□□ -1.71
HCFC1P51610 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.39□□□□□ -1.71
HCFC1P51610 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.39□□□□□ -1.71
HCFC1P51610 AL356390.1-201ENST00000455684 397 ntBASIC4.39□□□□□ -1.71
HCFC1P51610 OR9N1P-201ENST00000491296 333 ntBASIC4.39□□□□□ -1.71
HCFC1P51610 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.39□□□□□ -1.71
HCFC1P51610 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC4.39□□□□□ -1.71
HCFC1P51610 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.39□□□□□ -1.71
HCFC1P51610 MTND1P36-201ENST00000522384 936 ntBASIC4.39□□□□□ -1.71
HCFC1P51610 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.39□□□□□ -1.71
HCFC1P51610 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.39□□□□□ -1.71
HCFC1P51610 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.39□□□□□ -1.71
HCFC1P51610 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HCFC1P51610 AL162233.1-201ENST00000620014 944 ntBASIC4.39□□□□□ -1.71
HCFC1P51610 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.39□□□□□ -1.71
HCFC1P51610 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.39□□□□□ -1.71
HCFC1P51610 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HCFC1P51610 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
HCFC1P51610 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HCFC1P51610 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
HCFC1P51610 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HCFC1P51610 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
HCFC1P51610 AC007618.1-201ENST00000366455 732 ntBASIC4.38□□□□□ -1.71
HCFC1P51610 RNU6-891P-201ENST00000384280 111 ntBASIC4.38□□□□□ -1.71
HCFC1P51610 AC092570.3-201ENST00000420113 693 ntBASIC4.38□□□□□ -1.71
HCFC1P51610 NRBF2P3-201ENST00000432731 865 ntBASIC4.38□□□□□ -1.71
HCFC1P51610 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.38□□□□□ -1.71
HCFC1P51610 RPL31P53-201ENST00000457065 348 ntBASIC4.38□□□□□ -1.71
HCFC1P51610 AC020898.1-201ENST00000474167 787 ntBASIC4.38□□□□□ -1.71
HCFC1P51610 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.38□□□□□ -1.71
HCFC1P51610 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.38□□□□□ -1.71
HCFC1P51610 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.38□□□□□ -1.71
HCFC1P51610 AC092709.1-201ENST00000521355 1045 ntBASIC4.38□□□□□ -1.71
HCFC1P51610 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.38□□□□□ -1.71
HCFC1P51610 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
HCFC1P51610 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.38□□□□□ -1.71
HCFC1P51610 BGLT3-201ENST00000564523 994 ntBASIC4.38□□□□□ -1.71
HCFC1P51610 AC126365.2-201ENST00000580630 379 ntBASIC4.38□□□□□ -1.71
HCFC1P51610 AC253576.2-201ENST00000618815 580 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms