Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AL049830.4-201ENST00000555149 351 ntBASIC2.85□□□□□ -1.95
APOBP04114 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.85□□□□□ -1.95
APOBP04114 AC116553.2-201ENST00000564203 463 ntBASIC2.85□□□□□ -1.95
APOBP04114 AC053481.4-201ENST00000583164 216 ntBASIC2.85□□□□□ -1.95
APOBP04114 AC009120.7-201ENST00000623452 780 ntBASIC2.85□□□□□ -1.95
APOBP04114 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
APOBP04114 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC2.85□□□□□ -1.95
APOBP04114 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
APOBP04114 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
APOBP04114 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
APOBP04114 LRRC37A9P-201ENST00000603850 5376 ntBASIC2.84□□□□□ -1.95
APOBP04114 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC2.84□□□□□ -1.95
APOBP04114 MTND4LP17-201ENST00000414607 293 ntBASIC2.84□□□□□ -1.95
APOBP04114 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC2.84□□□□□ -1.95
APOBP04114 GOT2P5-201ENST00000433995 546 ntBASIC2.84□□□□□ -1.95
APOBP04114 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC2.84□□□□□ -1.95
APOBP04114 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC2.84□□□□□ -1.95
APOBP04114 AC005858.4-201ENST00000623191 700 ntBASIC2.84□□□□□ -1.95
APOBP04114 U3.53-201ENST00000628922 216 ntBASIC2.84□□□□□ -1.95
APOBP04114 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
APOBP04114 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
APOBP04114 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
APOBP04114 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
APOBP04114 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC2.84□□□□□ -1.95
APOBP04114 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
APOBP04114 CRYBB2P1-203ENST00000415709 538 ntBASIC2.84□□□□□ -1.95
APOBP04114 BTF3P10-201ENST00000433415 495 ntBASIC2.84□□□□□ -1.95
APOBP04114 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC2.84□□□□□ -1.95
APOBP04114 OR7E10P-201ENST00000526420 991 ntBASIC2.84□□□□□ -1.95
APOBP04114 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.84□□□□□ -1.95
APOBP04114 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.84□□□□□ -1.95
APOBP04114 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC2.84□□□□□ -1.95
APOBP04114 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC2.84□□□□□ -1.95
APOBP04114 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC2.84□□□□□ -1.95
APOBP04114 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.84□□□□□ -1.95
APOBP04114 AP003497.2-201ENST00000624220 967 ntBASIC2.84□□□□□ -1.95
APOBP04114 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
APOBP04114 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC2.84□□□□□ -1.95
APOBP04114 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
APOBP04114 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.95
APOBP04114 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
APOBP04114 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
APOBP04114 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC2.84□□□□□ -1.95
APOBP04114 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC2.84□□□□□ -1.95
APOBP04114 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
APOBP04114 SNX18P3-202ENST00000565670 1750 ntBASIC2.84□□□□□ -1.96
APOBP04114 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
APOBP04114 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
APOBP04114 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC2.84□□□□□ -1.96
APOBP04114 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
APOBP04114 RNA5SP124-201ENST00000362739 110 ntBASIC2.84□□□□□ -1.96
APOBP04114 MIR183-201ENST00000384958 110 ntBASIC2.84□□□□□ -1.96
APOBP04114 RNA5SP241-201ENST00000391326 114 ntBASIC2.84□□□□□ -1.96
APOBP04114 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC2.84□□□□□ -1.96
APOBP04114 AC069157.1-201ENST00000421749 137 ntBASIC2.84□□□□□ -1.96
APOBP04114 AL445584.1-201ENST00000431451 330 ntBASIC2.84□□□□□ -1.96
APOBP04114 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC2.84□□□□□ -1.96
APOBP04114 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC2.84□□□□□ -1.96
APOBP04114 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.84□□□□□ -1.96
APOBP04114 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC2.84□□□□□ -1.96
APOBP04114 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC2.84□□□□□ -1.96
APOBP04114 AC007546.1-201ENST00000619452 559 ntBASIC2.84□□□□□ -1.96
APOBP04114 AC015722.2-201ENST00000622210 551 ntBASIC2.84□□□□□ -1.96
APOBP04114 AC112484.5-201ENST00000624189 228 ntBASIC2.84□□□□□ -1.96
APOBP04114 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC2.84□□□□□ -1.96
APOBP04114 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
APOBP04114 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
APOBP04114 AC007159.1-201ENST00000566529 4706 ntBASIC2.84□□□□□ -1.96
APOBP04114 AC106871.1-201ENST00000568324 3102 ntBASIC2.84□□□□□ -1.96
APOBP04114 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
APOBP04114 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
APOBP04114 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.96
APOBP04114 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC2.84□□□□□ -1.96
APOBP04114 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
APOBP04114 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
APOBP04114 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC2.83□□□□□ -1.96
APOBP04114 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC2.83□□□□□ -1.96
APOBP04114 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC2.83□□□□□ -1.96
APOBP04114 AP000580.1-201ENST00000404439 358 ntBASIC2.83□□□□□ -1.96
APOBP04114 AL035246.1-201ENST00000433554 1255 ntBASIC2.83□□□□□ -1.96
APOBP04114 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC2.83□□□□□ -1.96
APOBP04114 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC2.83□□□□□ -1.96
APOBP04114 OR5D2P-201ENST00000524390 911 ntBASIC2.83□□□□□ -1.96
APOBP04114 AL731532.1-201ENST00000623972 4236 ntBASIC2.83□□□□□ -1.96
APOBP04114 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
APOBP04114 MED23-203ENST00000368058 4576 ntTSL 5 BASIC2.83□□□□□ -1.96
APOBP04114 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC2.83□□□□□ -1.96
APOBP04114 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
APOBP04114 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC2.83□□□□□ -1.96
APOBP04114 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
APOBP04114 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
APOBP04114 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC2.83□□□□□ -1.96
APOBP04114 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
APOBP04114 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
APOBP04114 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC2.83□□□□□ -1.96
APOBP04114 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
APOBP04114 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC2.83□□□□□ -1.96
APOBP04114 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC2.83□□□□□ -1.96
APOBP04114 NDUFB4P4-201ENST00000404822 243 ntBASIC2.83□□□□□ -1.96
APOBP04114 TPT1P2-201ENST00000413105 503 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms