Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM38O00635 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM38O00635 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
TRIM38O00635 AC114786.1-201ENST00000512892 1415 ntBASIC5.65□□□□□ -1.5
TRIM38O00635 AC093311.1-201ENST00000506586 2021 ntBASIC5.65□□□□□ -1.5
TRIM38O00635 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TRIM38O00635 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.65□□□□□ -1.5
TRIM38O00635 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.65□□□□□ -1.5
TRIM38O00635 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.65□□□□□ -1.5
TRIM38O00635 AP000473.2-201ENST00000602659 1537 ntBASIC5.65□□□□□ -1.5
TRIM38O00635 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TRIM38O00635 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TRIM38O00635 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TRIM38O00635 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
TRIM38O00635 C4BPAP1-201ENST00000415474 1893 ntBASIC5.65□□□□□ -1.5
TRIM38O00635 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TRIM38O00635 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.65□□□□□ -1.5
TRIM38O00635 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
TRIM38O00635 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
TRIM38O00635 RMRPP5-201ENST00000411156 267 ntBASIC5.65□□□□□ -1.5
TRIM38O00635 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.65□□□□□ -1.5
TRIM38O00635 AL357752.1-201ENST00000412817 349 ntBASIC5.65□□□□□ -1.5
TRIM38O00635 HMGB3P31-201ENST00000413333 595 ntBASIC5.65□□□□□ -1.5
TRIM38O00635 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.65□□□□□ -1.5
TRIM38O00635 USP12PY-201ENST00000427677 1064 ntBASIC5.65□□□□□ -1.5
TRIM38O00635 HMGB3P5-201ENST00000428894 612 ntBASIC5.65□□□□□ -1.5
TRIM38O00635 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.65□□□□□ -1.5
TRIM38O00635 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.65□□□□□ -1.5
TRIM38O00635 AC096775.1-201ENST00000437724 448 ntBASIC5.65□□□□□ -1.5
TRIM38O00635 ARF4P4-201ENST00000439608 520 ntBASIC5.65□□□□□ -1.5
TRIM38O00635 AL663074.2-201ENST00000440621 479 ntBASIC5.65□□□□□ -1.5
TRIM38O00635 RPL5P25-201ENST00000441148 775 ntBASIC5.65□□□□□ -1.5
TRIM38O00635 AL353093.1-201ENST00000441292 436 ntBASIC5.65□□□□□ -1.5
TRIM38O00635 MTND2P22-201ENST00000444325 1033 ntBASIC5.65□□□□□ -1.5
TRIM38O00635 RNU7-27P-201ENST00000459281 62 ntBASIC5.65□□□□□ -1.5
TRIM38O00635 RPL35AP19-201ENST00000469425 329 ntBASIC5.65□□□□□ -1.5
TRIM38O00635 PFN1P6-201ENST00000476786 399 ntBASIC5.65□□□□□ -1.5
TRIM38O00635 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.65□□□□□ -1.5
TRIM38O00635 RPL32P33-201ENST00000487023 394 ntBASIC5.65□□□□□ -1.5
TRIM38O00635 RPL32P9-201ENST00000487963 407 ntBASIC5.65□□□□□ -1.5
TRIM38O00635 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC5.65□□□□□ -1.5
TRIM38O00635 AC002456.2-201ENST00000509356 380 ntBASIC5.65□□□□□ -1.5
TRIM38O00635 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC5.65□□□□□ -1.5
TRIM38O00635 AC021678.3-201ENST00000517893 476 ntBASIC5.65□□□□□ -1.5
TRIM38O00635 AC010376.1-201ENST00000522101 334 ntBASIC5.65□□□□□ -1.5
TRIM38O00635 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.65□□□□□ -1.5
TRIM38O00635 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC5.65□□□□□ -1.5
TRIM38O00635 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.65□□□□□ -1.5
TRIM38O00635 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.65□□□□□ -1.5
TRIM38O00635 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.65□□□□□ -1.5
TRIM38O00635 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
TRIM38O00635 AC019322.1-201ENST00000571869 389 ntBASIC5.65□□□□□ -1.5
TRIM38O00635 FKBP1AP1-201ENST00000594588 318 ntBASIC5.65□□□□□ -1.5
TRIM38O00635 BNIP3P32-201ENST00000600015 554 ntBASIC5.65□□□□□ -1.5
TRIM38O00635 AP002802.2-201ENST00000605877 235 ntBASIC5.65□□□□□ -1.5
TRIM38O00635 AC112503.1-201ENST00000608436 391 ntBASIC5.65□□□□□ -1.5
TRIM38O00635 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.65□□□□□ -1.5
TRIM38O00635 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.65□□□□□ -1.5
TRIM38O00635 AC026422.1-201ENST00000623961 452 ntBASIC5.65□□□□□ -1.5
TRIM38O00635 AP003399.1-201ENST00000637534 361 ntBASIC5.65□□□□□ -1.5
TRIM38O00635 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.65□□□□□ -1.51
TRIM38O00635 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
TRIM38O00635 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
TRIM38O00635 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
TRIM38O00635 CASC19-248ENST00000641674 1356 ntBASIC5.65□□□□□ -1.51
TRIM38O00635 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.65□□□□□ -1.51
TRIM38O00635 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TRIM38O00635 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.65□□□□□ -1.51
TRIM38O00635 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.64□□□□□ -1.51
TRIM38O00635 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM38O00635 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM38O00635 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM38O00635 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.64□□□□□ -1.51
TRIM38O00635 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM38O00635 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM38O00635 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM38O00635 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM38O00635 GAPDHP24-201ENST00000328713 983 ntBASIC5.64□□□□□ -1.51
TRIM38O00635 AL159987.1-201ENST00000347911 293 ntBASIC5.64□□□□□ -1.51
TRIM38O00635 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM38O00635 RNU1-19P-201ENST00000363306 165 ntBASIC5.64□□□□□ -1.51
TRIM38O00635 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.64□□□□□ -1.51
TRIM38O00635 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM38O00635 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.64□□□□□ -1.51
TRIM38O00635 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.64□□□□□ -1.51
TRIM38O00635 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.64□□□□□ -1.51
TRIM38O00635 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.64□□□□□ -1.51
TRIM38O00635 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM38O00635 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.64□□□□□ -1.51
TRIM38O00635 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.64□□□□□ -1.51
TRIM38O00635 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.64□□□□□ -1.51
TRIM38O00635 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM38O00635 AC092447.2-201ENST00000435487 669 ntBASIC5.64□□□□□ -1.51
TRIM38O00635 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM38O00635 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM38O00635 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM38O00635 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM38O00635 AC006539.1-201ENST00000481419 501 ntBASIC5.64□□□□□ -1.51
TRIM38O00635 RPL38P3-201ENST00000484463 213 ntBASIC5.64□□□□□ -1.51
TRIM38O00635 RN7SL423P-201ENST00000486202 304 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms